KEGG   Danio rerio (zebrafish): 449794
Entry
449794            CDS       T01004                                 
Symbol
h2ax1
Name
(RefSeq) H2A.X variant histone family member 1
  KO
K11251  histone H2A
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03082  ATP-dependent chromatin remodeling
dre04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    449794 (h2ax1)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    449794 (h2ax1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dre03036]
    449794 (h2ax1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    449794 (h2ax1)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histones
    449794 (h2ax1)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   449794 (h2ax1)
SSDB
Motif
Pfam: Histone_H2A_C Histone CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 449794
NCBI-ProteinID: NP_001005967
ZFIN: ZDB-GENE-041010-42
Ensembl: ENSDARG00000068995
UniProt: Q5XJK2
Position
10:29816687..29817590
AA seq 128 aa
MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK
TEKPAKSK
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtctggaagaggtaaaaccggaggaaaggcccgcgcgaaggccaaatctcgttcatcc
agagctggacttcagtttccagtcggacgtgtacacagattgctacgcaagggaaattac
gccgagcgcgtaggcgcaggagcccccgtgtatttggccgctgtcctggagtacctgacg
gctgagatcctcgagctggccgggaacgcagcccgggacaacaagaaaacaagaattatc
ccccggcacctacagctggctgtccgaaacgacgaggagctcaacaagcttttaggcggc
gttaccatcgcccagggcggagtgctcccaaacatccaggcagtgctgctgcccaagaaa
accgagaagccagccaagagcaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (45)   

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