KEGG   Danio rerio (zebrafish): 450056
Entry
450056            CDS       T01004                                 
Symbol
tbc1d16
Name
(RefSeq) TBC1 domain family member 16
  KO
K24797  TBC1 domain family member 16
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    450056 (tbc1d16)
Membrane trafficking [BR:dre04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab4 associated proteins
    450056 (tbc1d16)
SSDB
Motif
Pfam: RabGAP-TBC PH_RBD
Other DBs
NCBI-GeneID: 450056
NCBI-ProteinID: NP_001006076
ZFIN: ZDB-GENE-041010-179
Ensembl: ENSDARG00000036994
UniProt: E7FE32
Position
3:18437474..18498865
AA seq 717 aa
MSFGRLLRRASSKASDFLTFNVGTGGSRSVLDGEIIFSKNNVCVHPAEPLPGLPEHHPGY
LCVHLEKDETLGSTLILTWVPNSRIQRQDEEALRYITPESSPVRRNPRRRAHRSHSRPPA
APEEEEAADEEGQEPQNQALLEEGDEGSCELSADEVSRDSTIGSDSDTFSSPFCLSPVSE
ALGESSSSVFLDNESRECDEPMAHSASSASSLDSHAPSESSHSQGVRWEEQQNVMALEHL
CGVFRVDLGHMRSLRLFFSDEACTCGQLVIASRESQYKILHFHHAGLDKLAEVFQQWKCC
RETQLKDQVSDEKSCMQFSIRRPTLPSAEMHPEERLYRRLDVSSWLRHLNNSGQVLEEYK
LRKAIFFGGIDPSIRGEVWPFLLHYYSYDSTSEEREAWRLQKRGEYQDIQQRRLSMSPEE
HSEFWRKVQFTVDKDVVRTDRSNMFFRGENNPNVEIMRRILLNYAVFNPDMGYCQGMSDL
VAPLLTEIQDESDTFWCFVGLMENTIFISSPRDEDMERQLMYLRELLRLMLPRFHQHLTR
LGEDGLQLLFCHRWVLLCFKREFPDAEALRMWEACWAHYQTDYFHLFLCVAIIVLYGDDV
TEQQLATDQMLLHFSNLSMHMNGELVLRKARSLLYQFRLLPRIPCSLHDLCKLCGPGMWD
SRYIPAIECSGEHPDSQSCPYGGTATPESPPLPSPNQPIEGKRGSKKRDIFTFRKHS
NT seq 2154 nt   +upstreamnt  +downstreamnt
atgtcattcggtcgactcctgcgacgtgcatcctccaaagcctctgactttttgacgttt
aacgtgggcacagggggttcccggagcgtgctggatggagagatcatcttctccaagaac
aatgtgtgtgtgcatcctgccgaacccctgcctggactgcctgaacatcacccaggttat
ctgtgcgtgcacctggagaaagacgagacccttggctccacacttatcctcacctgggtg
cctaactctcgcatccagcggcaagacgaggaggccctacgctacatcacgcctgaaagc
tcgcccgtccgcagaaatccccgccgccgagcccaccggagccactctcgcccgccagcc
gcccctgaggaggaagaggctgctgatgaagagggccaggagccgcagaaccaggcgctg
ctggaagaaggagacgaaggctcatgtgagctctctgcagatgaggtgagccgggacagc
accattggctccgattcggacaccttctcttcaccgttctgcctatcgccggtcagcgag
gctctgggcgaaagcagcagctccgtcttcctggacaatgagagcagggaatgcgatgaa
ccaatggctcactctgcaagctctgcctccagcctggacagccacgccccttcagaaagc
agtcattcacagggagtccgctgggaggagcagcagaatgtcatggcattagagcacctg
tgtggcgtgttcagagttgacctgggtcacatgaggtcactccggctctttttcagtgat
gaggcctgcacctgtgggcagctggtcatcgccagcagagagagccagtacaagatcctt
cacttccaccacgcaggcctggataaactggctgaggtgtttcagcagtggaaatgctgc
agggagactcagctcaaagaccaggtgtcagatgagaagtcctgtatgcagttttccatc
cgtcgacccacactaccgtctgccgagatgcaccccgaggagcgtctgtaccgccggctg
gacgtcagctcttggctccggcatctgaacaacagcggccaggtgctggaggagtacaag
cttagaaaggcaatcttcttcggaggcatcgatccgtccatccgtggtgaagtctggccg
tttctccttcactactacagctatgattccacatctgaggagcgcgaggcctggagactg
cagaaacgcggggagtaccaggacatccagcagaggaggttgtccatgagtccagaagag
cacagtgagttctggaggaaggtccagttcacggtggataaagatgttgtcaggacggac
cgaagcaacatgttttttagaggagaaaacaaccccaatgtagaaatcatgaggcgtatc
ctgttgaactatgcggtgtttaacccagacatgggctactgtcagggcatgtccgacctg
gtggctcctctgctgactgagatccaggacgagagcgacacgttctggtgtttcgtgggt
ctgatggagaacaccatcttcatcagctctccgagagacgaggatatggagagacagctg
atgtacctgcgggagctcctgcggctcatgctgccccggtttcaccagcatctgacccgg
ctgggtgaggatggccttcagctgctgttctgccaccgctgggtcttgctgtgcttcaaa
cgagagtttccggacgctgaagctctgcgcatgtgggaagcctgctgggcacactatcag
acggactactttcacctgttcctgtgcgttgccatcattgtgctgtacggcgatgatgtc
acagagcagcagcttgccacagatcaaatgctgctgcacttcagtaacctctccatgcac
atgaatggagagctggtgctgaggaaggcacgtagtcttctgtatcaattccgccttctt
cccagaatcccctgcagcttacatgacctgtgtaaactctgcggacctggaatgtgggac
agccgctacatccctgccatagaatgttccggggagcatccagactctcagagctgcccc
tatggaggcactgccacccccgaaagcccgcccttacccagccccaaccagcccatcgag
ggcaagcggggctccaagaaacgggacattttcaccttccgcaagcactcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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