KEGG   Danio rerio (zebrafish): 492349
Entry
492349            CDS       T01004                                 
Symbol
fbxl4
Name
(RefSeq) F-box/LRR-repeat protein 4
  KO
K10270  F-box and leucine-rich repeat protein 4
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dre04121]
    492349 (fbxl4)
   03029 Mitochondrial biogenesis [BR:dre03029]
    492349 (fbxl4)
Ubiquitin system [BR:dre04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     492349 (fbxl4)
Mitochondrial biogenesis [BR:dre03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    492349 (fbxl4)
SSDB
Motif
Pfam: LRR_4 F-box-like F-box F-box_4 LRR_9
Other DBs
NCBI-GeneID: 492349
NCBI-ProteinID: NP_001007316
ZFIN: ZDB-GENE-041114-187
Ensembl: ENSDARG00000026941
UniProt: Q5U388
Position
16:complement(32566218..32582787)
AA seq 607 aa
MFYYICLRRRSRSGTRSEALGSRRAVELGQRSALPVTVEVEQYGKEILDFSSHYGSENSM
SYTMWNLAGVPNVYPSSGDFTQTAVFRTYGTWWEQCISSTPRFRRTPPSFHSQDYLELAF
EEPVYPTAVEVLETYHPGAIVKIMACSLNPFSQNPPTDVRWEVLWSGKPNKALTPQARQF
SPNIKQISFTTNLLRLEVNSSLLDYYTELDAVILRGVRERPILALYKIPVIDINDLSDSE
EEISEAGGLCCRSTAENRQSLANGYFDRLPYELIQLIVSHLPVPDLCRLAQSCKLFHKHC
CDPLQYIQLSLQPYWARLTDASLCHLQSRCTLLQRLNLSWTGNRGAVTPAGFCSFMKACG
ASLVCLEVSCCHFLTEACLEVITQTCPCLQELNLASCDRLQPQAFNHIAKLTHLRRLVLY
RTKVEQSAILSILTFCPELRHLNLGSCVMIEDYDVVVSMLSARCRSLRSLDLWRCRNLSE
RGLAELVSGCRLLEELDLGWCSTLQSSSACFQHLARSLPRLRKLFLTANRTVCDADLEEL
AANCSALQHLDILGTRMVSSASLRKLLQCCPRLKLLDVSFCSQIDSRFVQELNGLFPNVS
IKKSFTQ
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgttttactatatctgtctacggcgacgctccaggagcgggacgcgcagcgaagcgttg
ggtagccgacgggcggtggagctaggtcaacgttcagcgctgcccgtgactgtagaggtt
gagcagtacggcaaggagatcctggacttcagctctcactacggcagtgagaacagcatg
tcctacaccatgtggaacctagcaggagtgcctaacgtgtacccgagctcaggagacttc
acccagactgctgtgtttcgcacttatggaacctggtgggagcagtgtatcagctctacg
cctcgattccgccgtacgccacccagtttccacagccaggactacttggaactggccttc
gaggagcctgtctatcccacagcagtggaggtgctggagacctaccaccccggagctatt
gttaagatcatggcgtgctcgctcaaccctttctcccagaacccaccgactgatgtgagg
tgggaggttctgtggtccggcaaacccaacaaggctttgacccctcaagctcgccagttc
tcccccaatatcaagcagatcagcttcaccaccaacctgctgcgcctggaggtcaacagc
tctctgctggactactacactgagctggatgcagtgatcctgcgaggagttcgagagaga
cccatcctggccctctataagatcccggtcatcgacatcaatgatctgagtgacagtgaa
gaggagatcagcgaagcaggaggcttgtgctgccgctcgactgcagagaacaggcagagt
ctggccaacggatactttgacagactcccttatgagcttatccagctgattgtgagtcac
ctgccggttccagacctgtgtcgactggctcaaagctgcaagctcttccacaagcattgc
tgtgacccgctgcagtacatccagctgagcctgcagccatactgggcacggctcacagac
gcctccctgtgccatctgcagagtcgctgtacccttctgcagagactcaacctgtcctgg
acgggcaaccgtggagccgtgacgcccgccggcttctgcagctttatgaaggcctgtggg
gcgagtctggtgtgtttggaggtgtcgtgctgtcatttcctgaccgaagcgtgtttagaa
gtgatcactcagacatgtccttgcctccaagagctcaatttggcttcctgtgaccgtctg
caacctcaggccttcaatcacatcgccaaactcacccatctgcgcaggctcgtgctctac
cgcaccaaagttgagcaatcagccatattgagcattctaacattctgcccagagctcaga
cacctcaacctggggagctgtgtaatgattgaggactatgatgtggttgtgagtatgctg
agcgcccgctgtcgttctctgcgttctctggacctgtggcgctgcagaaatctgagtgag
cgtggtctggccgagctggtttcaggctgccggctgctggaggagctggatctgggctgg
tgctccacacttcagagcagctccgcctgtttccagcacttggcccgcagtttaccccgt
ctgcgcaaactcttcctcaccgcaaatcgcactgtctgtgacgcagacctggaggagctg
gccgccaactgcagtgctctgcagcaccttgatatactgggcacacggatggtgagttca
gcctctctaagaaagttactgcagtgttgtcctcgtctgaagctgctggacgtgtccttc
tgctcacagatcgactcacgctttgtccaagagctcaatggccttttcccgaatgtgtcc
atcaagaaaagcttcactcagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (54)   
   KEGG ORTHOLOGY (1)   
   RefGene (48)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (68)   

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