KEGG   Danio rerio (zebrafish): 492800
Entry
492800            CDS       T01004                                 
Symbol
znf143a
Name
(RefSeq) zinc finger protein 143a
  KO
K20828  zinc finger protein 143/76
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04980  Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:dre00001]
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    492800 (znf143a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dre03021]
    492800 (znf143a)
Transcription machinery [BR:dre03021]
 Eukaryotic type
  RNA polymerase III system
   Other transcription-related factors
    Others
     492800 (znf143a)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2H2_8 zf-C2H2_jaz zf-C2H2_aberr FOXP-CC Zap1_zf1
Other DBs
NCBI-GeneID: 492800
NCBI-ProteinID: NP_001007442
ZFIN: ZDB-GENE-041114-154
Ensembl: ENSDARG00000012887
UniProt: Q5U3T5
Position
7:complement(67220374..67252086)
AA seq 613 aa
MLLAQINQSADFQHEDDSQEVTLCLTETVGIADCDQSMDTVSLQAVTLSDGSTAYIPHNP
QDNSIVEGQVIQLEDGSSAYVQHIAVPKADEPNNWMGSSVCDVVGNESLRLEDAQTVQLE
DGTTAYIHHTTKDVYEPSTLQAVQLEDGSTAYIQHAVQVSQPNTILAIQANGTVADLHTD
AAIDQETMNALEQYTTKIEEIDSYTNPELISNDPQGVVEMQIVLQGQGIRRNVQSPGEKC
FRCNYDGCGKLYTTANHLKVHERAHTGDKPYCCDLPGCGKKFATGYGLKSHIRTHTGEKP
YRCQELDCKKSFKTSGDLQKHTRIHTGEKPFLCPFPGCGRSFTTSNICKVHVRTHTGEKP
YHCPEPGCNRAFASATNYKNHIRIHTGERPYVCTVPGCDKRFTEYSSLYKHNVVHTPCKP
YKCNHCGKTYKQISTLVMHKRSAHNDSEPIEEEMEGYFEPPSEAIDDPSLSVSPVKCEDS
GPEMTSEISDVSEQQHVTLITQDGGSQAIGNAITMVTQDGSMITIPPTESLLASAEAHSV
TVATEDGTERQMAIMMPELTSRNTQDGLSAHPITLLATSNGTQIAVQLSEQTSLEEALRI
ASSLQAEEAELAD
NT seq 1842 nt   +upstreamnt  +downstreamnt
atgctgctggctcagataaatcagtcagcagatttccagcatgaggacgattctcaggag
gtcacgctctgcctaacggagactgtggggattgcagattgtgatcagagcatggacacg
gtcagtttgcaggctgtgactttatcagacggctccacggcatatatacctcacaatcct
caagacaacagtatagttgaaggccaggtgatccagttagaagatggctcctctgcttat
gtgcaacacattgcggttccaaaagcagatgagccaaacaactggatgggctcctctgtc
tgtgatgttgttggtaatgagagtttgagactggaggatgctcagaccgttcagctggaa
gatggaactactgcctatatccaccacaccacaaaggatgtgtatgaacccagtacactg
caggcggtgcagttagaggacggttccactgcttatattcagcatgccgttcaggtgtca
cagccaaacaccattctggccatccaggcaaatggcacagtagcagatttacacacggat
gcagccattgaccaggaaacaatgaatgctttggagcagtacacgaccaagattgaggaa
attgactcgtacacaaaccctgagctgatcagcaatgatcctcaaggtgttgtggagatg
cagattgttcttcagggtcaaggaattcggcgtaatgtgcagtcgcccggggagaaatgt
ttccggtgtaattatgacggatgcggaaagctttacaccactgctaatcatcttaaggta
catgaaagagcacatacaggggacaagccatactgttgtgacttacctggctgtggaaaa
aagtttgcaacaggttatggtctgaaaagtcacatcaggacacacactggagaaaaaccg
tatcgctgtcaggagctggactgtaaaaaatctttcaagacctcaggggaccttcaaaaa
cacaccagaatacacacgggagagaagccatttctatgtcctttcccgggctgtgggcga
tccttcactacctcaaacatctgtaaagtgcatgttcgcacgcacacaggagagaaaccg
taccactgcccagagccaggctgtaatcgggcctttgccagcgcaacgaattacaagaac
cacatacggatccatacaggtgagaggccgtacgtttgcacagttcctggttgtgacaag
cgcttcacggagtactcaagtctatacaagcataatgtagtgcacactccctgcaaaccc
tacaagtgcaatcactgtggaaaaacctacaagcagatttccacactggtcatgcacaag
cgctccgcacacaacgactccgagcctatagaagaggagatggagggctattttgagccc
ccttcagaggctatagatgacccgtccctcagcgtcagcccggtgaagtgtgaagactct
ggtcctgaaatgacttctgaaatctcagatgtcagcgaacaacagcacgtaacgcttatc
acacaggatggaggttcacaggctattggaaatgcaatcactatggtgacacaagatggc
agtatgatcaccatcccacccactgaatctttgctggcatcagcggaggctcattcagtt
actgtagccacagaggatgggactgaaagacagatggctattatgatgcctgaattaaca
tctaggaacacacaggatggattatcagcacatcccatcacacttctggctacttctaat
ggcacacagattgctgttcagctcagtgaacagacttcgctggaagaagctttgagaata
gcatcatcattacaagcagaagaagcagagctggctgattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (58)   

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