KEGG   Danio rerio (zebrafish): 503573
Entry
503573            CDS       T01004                                 
Symbol
pcdh1gb2
Name
(RefSeq) protocadherin 1 gamma b 2
  KO
K16494  protocadherin beta
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:dre04515]
    503573 (pcdh1gb2)
Cell adhesion molecules [BR:dre04515]
 Cadherins
  Protocadherins
   503573 (pcdh1gb2)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_tail Peptidase_S55 7TM_GPCR_Sri
Other DBs
NCBI-GeneID: 503573
NCBI-ProteinID: NP_001012676
ZFIN: ZDB-GENE-041118-19
Ensembl: ENSDARG00000101307
UniProt: I6LC25
Position
10:21677058..21820057
AA seq 951 aa
MMPFILLWSNSHNPRMIFTHSKWQVVFFILCLYGMDVVYCNVRYSIPEEMPEGSFVGNIA
KDLGIEISRLISGKARVVTKSGRQYVDLSRDKGTLVVKERIDREELCKQTTPCSFSFDLI
VENPIQLHRVTVEVQDINDNAPLFPKESVNLEISENAVLGARFPLDRAMDTDVGLNGIQS
YKLHPTDNFKLEVHSLTDGNKYIEMILQRELDREERDEIKLVLLATDGGSPQKSGTVKIH
VTILDANDNAPVCKQSVFKTEVRENSPAGTVMGTVSAADADEGVNGHVSYYFALANKEER
ELFNINSETGEVTLLAHLDYESQNSYQLNINARDKGGLSDTCKIVIDVTDENDNPPTIQL
MSFSNTIAENSPVGTTVAVINVEDADSGKNGLVHFSINQNIPFKIESTFSEYYSLITDDM
LDRETVTEYNITILVSDQGSPARHSNKTLNVKISDVNDNPPKFGSDEYKTFVNENNSPGV
TILTVKANDADWGPNAQLSYFLKDEDIRGAPLSSLVSVDALTGTVHAVKSFDFEQLKSFS
FNVTARDGGSPPLSSEVTITINIQDQNDNAPQVLYPVQTGASVVAEIVPRAVDVGYLVTK
VVAVDVDSGQNAWLSYKLQKAPDRALFEVGLQNGEIRTVRQVTDKDAVKQKLTVVVEDNG
QPSRSAVVSINVAVADSFPEVLSEFTDITHEKQYNDSLTFYLVLALAAVSFLFITCVVVI
ISVKIYRWRQSRFLYQSNLPVIPYYPPHYADTGVTGTLPHGYNYEVCMTTDSRKSDCKFS
TLGGQSVLVVDPSFTETMQRAMKEKNILENSELHEMQKPPNTDWRFPPNQRPGPSGAGAR
PEEAGAGAGVIAGTGPWPNPPTEAEQLQAMMAAANASEATATLGPRYNLQYGPDYRQNVY
IPGSTATLTANPQQQVLQQALPPPQALPPTEAPKAAQTPASKKKPTKKDKK
NT seq 2856 nt   +upstreamnt  +downstreamnt
atgatgccgttcatattgttgtggagcaattcacacaatccacgaatgatttttacgcat
tcaaaatggcaggttgtttttttcatcctctgcttgtacggaatggacgtcgtttattgc
aatgtgagatattccatcccggaggaaatgccggagggatcattcgttggaaacatcgcc
aaggatcttggaatagagataagtagactgatatctggaaaagctcgtgttgtaacaaag
agtggacgacagtatgtcgacctgagcagagacaaagggactctagtagttaaagaaagg
atagatcgcgaggagctctgtaagcaaacgacgccgtgtagcttcagttttgatctcatc
gttgaaaacccaatccagctgcatcgagttacggttgaggtacaagacatcaacgataat
gctcccttatttccgaaagaaagtgttaatttagaaataagcgaaaacgcagttttaggt
gctcgctttcctttggatcgcgccatggatacagatgtaggtctaaatggaatacagagc
tataaactacacccaactgacaattttaaactggaggtgcacagtctgactgatggaaat
aaatacattgagatgattttacaacgagaactagatcgagaggagcgtgatgagattaaa
ttggttcttctggcaactgatggtggatcacctcagaaatcaggcactgtaaaaatacac
gttactattcttgacgctaatgacaatgccccggtgtgtaaacagtcagtatttaaaact
gaggtgagagaaaattcacctgctggtactgtcatgggtactgttagcgctgcagatgcc
gatgaaggtgttaatggccatgtttcctattactttgctcttgctaacaaagaagaaaga
gaactatttaatataaactcagaaacaggcgaggttacacttcttgctcatttggattac
gaatctcaaaatagttaccaattaaacattaatgcaagagataaaggagggttgtcagac
acttgtaaaattgttatagatgtaactgatgaaaatgataaccctccaactatacagctg
atgtccttctcaaacactattgctgaaaattctccagtgggaacaacagtagctgttatt
aatgtagaagatgcggattcgggcaaaaatggccttgttcatttctcaataaatcaaaat
attccttttaaaatagagtcaacattctcagaatattacagtttgataactgatgatatg
cttgatcgagaaactgttactgaatataacataacgatcttggtatcggaccaaggaagt
ccagcgcgacactctaacaaaacacttaatgttaaaatatcagatgtcaatgataacccg
cccaaattcggctcagatgaatataaaacatttgttaatgaaaataattcccctggcgtg
actatactgactgttaaagcaaatgatgctgactggggtcccaacgcgcagttatcttac
ttcctgaaggatgaagatatacgcggtgcaccgctaagttcactcgtgtctgtagatgct
cttactggaacggttcatgctgtaaaatcttttgattttgaacagttaaaatcgttttct
tttaacgtgacagctcgagatggaggatccccgccactgagctctgaagtaacaataacc
atcaatattcaagaccagaatgacaacgctcctcaggttctgtatccagtacagactggc
gcttcagtggtggctgagattgtgcctcgtgctgtagatgttggatacctggtcactaaa
gtggtggctgtggatgtggactctggtcagaatgcctggctctcctataaactccagaaa
gctccagacagagcgctgtttgaagtgggtttacagaatggagaaataagaactgtgcga
caagtcactgataaagatgctgtcaaacaaaaactcactgttgttgtggaggataacgga
cagccctctcgctcagctgtggtctccattaacgtggctgtggctgacagctttcccgaa
gtgctgtcagagttcacagacattacgcatgagaaacaatataacgacagcttaactttt
tatttagttctggctctggccgctgtttctttcctattcatcacttgtgtggttgtgata
atatcagttaaaatctacagatggagacaatctcgcttcctctatcagtccaatctgcct
gttattccgtattatccaccgcattacgcagacacaggagtcactggaactctgccgcac
ggctataattatgaagtgtgcatgacgactgactcgaggaagagtgactgtaagttttct
acactcgggggtcagagtgttttagtggtggaccccagtttcactgagacgatgcagcgc
gcaatgaaggaaaagaacattcttgaaaactctgaactgcacgaaatgcaaaagccacct
aatactgactggcgatttcccccaaaccagaggcctggacccagcggggctggagcacgt
cctgaagaggcaggtgccggtgctggtgtgatagcaggaacaggaccatggcccaacccc
cctactgaggctgaacagctccaggctatgatggcagcagcaaacgcaagtgaagccact
gcgactcttggccctcgctacaatctacagtatggcccggattaccgtcagaacgtctac
atcccaggcagcactgccacccttacagccaaccctcagcaacaggttctccagcaggcc
cttcctccaccacaggcccttccacctaccgaagcccccaaagcggctcaaacaccagcc
agtaagaagaaacccacaaagaaagacaagaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (6)   
   Pfam (6)   
All databases (36)   

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