KEGG   Danio rerio (zebrafish): 541325
Entry
541325            CDS       T01004                                 
Symbol
ccnh
Name
(RefSeq) cyclin-H
  KO
K06634  cyclin H
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03022  Basal transcription factors
dre03420  Nucleotide excision repair
dre04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    541325 (ccnh)
  09124 Replication and repair
   03420 Nucleotide excision repair
    541325 (ccnh)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    541325 (ccnh)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dre03021]
    541325 (ccnh)
   03400 DNA repair and recombination proteins [BR:dre03400]
    541325 (ccnh)
Transcription machinery [BR:dre03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     541325 (ccnh)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     541325 (ccnh)
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N CHD1-like_C
Other DBs
NCBI-GeneID: 541325
NCBI-ProteinID: NP_001013471
ZFIN: ZDB-GENE-050320-13
Ensembl: ENSDARG00000007657
UniProt: Q5BJA4
Position
5:complement(47963938..47975440)
AA seq 319 aa
MYHNSSQKKFWTYDKEETLDKLRLEANQKFCSKALSSGKPGINESTLLNEQEEKVLFKHY
EKRLLDFCAVFKPVMPKSVVGTACMYFRRFYLNNSLMEYHPRTIMLTCAYLSCKVDEFNV
SSTQFVGNLQESPAGQERAVDQILEYELLLIQQLNFHLVVHNPYRPLEGFLIDLKTRYPL
LENPEMLRKSAEDFLNRATMTDAGLLFSPSQIALTAVLNSAARAGLKMDVYLNECMGLKE
DKETLSKMYESMRRMTSLVKAYELPKAEEVSICKQKLERIYAEFATNLKRKHGYEDDDHI
VKRQMVADEEWTDDDLDAL
NT seq 960 nt   +upstreamnt  +downstreamnt
atgtatcacaacagctcacagaagaaattctggacatatgataaagaggaaactttggat
aaattaagacttgaagctaatcagaagttctgctcaaaagctctgtccagtggaaagcct
ggaataaatgaatccacacttctcaatgagcaggaagagaaagtgcttttcaaacactat
gagaagagattgctagacttttgtgctgtgtttaagcctgtgatgcctaaatctgttgtg
ggcacagcttgcatgtattttcgaagattctatttgaacaactcattaatggagtatcat
cctcggacaataatgttgacatgtgcatatctgtcctgtaaagtggatgagtttaatgtg
tccagcactcagtttgtggggaatcttcaggagagcccagcgggacaggagagagctgta
gatcagattctggagtatgaactgctccttatccagcagctgaattttcatctggtcgtt
cacaatccgtatcgacctttggagggttttctgattgatctgaagaccaggtacccattg
ttagagaacccagagatgcttagaaaaagtgctgaagactttctcaaccgagcaacaatg
acagatgccggactgctcttctctccatctcagattgctctcactgctgtcctcaatagc
gctgcacgtgctggcctcaagatggatgtatatttaaatgaatgtatggggcttaaggag
gataaagagaccctctcaaagatgtacgagtcaatgagacgaatgacaagtcttgttaaa
gcgtacgagcttcccaaagctgaggaagtcagtatctgcaaacagaaactggaaaggatt
tatgctgagtttgctacaaacctgaaaagaaaacatggatatgaagatgacgatcacatt
gtgaaaaggcagatggttgcagatgaagagtggactgatgatgatttggatgcattgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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