KEGG   Danio rerio (zebrafish): 554366
Entry
554366            CDS       T01004                                 
Symbol
chtf18
Name
(RefSeq) chromosome transmission fidelity protein 18 homolog
  KO
K11269  chromosome transmission fidelity protein 18
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dre03036]
    554366 (chtf18)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    554366 (chtf18)
SSDB
Motif
Pfam: AAA AAA_5 RuvB_N AAA_14 AAA_16 AAA_22 Rad17 AAA_18 nSTAND3 AAA_30 AAA_28 DUF6584 Zeta_toxin AAA_7 AAA_17 IstB_IS21 RFC1 AAA_33 NACHT Sigma54_activ_2 AAA_24 AAA_3 AAA_19 Viral_helicase1 TsaE RsgA_GTPase NB-ARC ABC_tran FoP_duplication bpMoxR EOS1
Other DBs
NCBI-GeneID: 554366
NCBI-ProteinID: NP_001103572
ZFIN: ZDB-GENE-050522-508
Ensembl: ENSDARG00000058480
UniProt: F1QF60
Position
1:9199038..9227201
AA seq 957 aa
MDEYDEMYGIEDDFERQFADELEVMAELESNNPPAAKVSEFRNKPITQTFEEALVSGDQP
SRKSVNNQNPESISPPVYEEEEESLTPKPKKRRQDVAKKLQFGVDQDDDITPPSSPEVYD
REVRDGPRFSLTLSPDRPAATKITTNVLDISGLGALQESPKQVTAAKRHAQKRPPAIGDY
ITVTDSMGNRVYLNKKEDVEKTPDPRAFRNSLNGLGLLAVPIEVLKEQIAERRHRQVVEE
SQRLTELMKSGIDSDLLAEEQTDSGVDGDSGEDEASSRLWVDQFSPQHYTDLLSDDFTNR
CLLKWLKLWDTVVFGRERKSRPVPVEARSNFTNAQNQNQAQRFKTKSQMTEEILEAELDQ
YKRPKFKVALLSGPPGLGKTTLAHIIAKHAGYNVVEINASDDRSAELFQKRIDTATQMKS
VLGANEKPNCLIIDEIDGAPAAAINILLATLNRKDSKDGEETGVNALKKKKKKQSVLLRP
IICICNDLYVPALRPLRQQAFLLVFPQTLPSRLAQRLAEISRRQGMKADTGTLMALCEKT
DNDIRSCINTLQFLHSRGQKHLDQRSVSSMCVGLKDQNKGLFSVWQEIFQLPRLKRKRIG
GDPFSGYDELGPKEGAQRLQHILHLVSSTGEHEKLTQGLYDNFLSMKLKDPGMLGVCSGL
DWLCFSDLLNECVLHGQNYSLMRYFPFLPAAFHQLYAATSVPRINYPHSHYEAFTKTQHI
RNALLAMLNDIPPAIQSRVCMSSLCLDILSLLLELISPKLRPVNPQLYSTREKQQLYDLI
DTMINYNLTYRQDRTPEGQYTYVLEPNIEDVVNYPGLPPRRQLTYQVKQLIARETELERM
RRVERAQQSRNPQKMETVNKNQEEKKTEVKKQTSRNHQQRLENIVKQTVVETRPELDFFG
RAIVPKEKPVVTATSEDGKVSGVLNIGKAVGNSDVWFRFNEGVSNAVRRNVYIRELL
NT seq 2874 nt   +upstreamnt  +downstreamnt
atggacgaatatgacgaaatgtacgggattgaggatgattttgaacgacagttcgcagat
gagttggaagtcatggctgaattggagagcaacaatccaccagctgcaaaagtgtctgaa
tttcgcaataagccgatcacacagacgttcgaggaagcccttgtgtccggagaccagcca
tcaaggaaatcagtaaataaccagaatccagagagcatctctccgccggtatacgaggag
gaagaggagtctctgacccctaaacccaagaaaaggaggcaagatgtggcgaaaaagctc
cagtttggcgttgaccaagatgatgacatcactcctccatcttccccagaggtttacgac
agggaagtgagagacgggcctagattttccctaaccctgagtccagacagaccagcagca
acaaaaataacgacaaatgttttagatattagtggactgggagctttacaggagtcaccg
aagcaggtgacggcagcaaaacgtcatgctcagaaacgcccacctgcaatcggagattac
atcacagtcacagactctatgggaaacagggtctaccttaacaagaaagaggatgtggag
aagacaccagacccgagagccttccgtaactcgctgaatggactaggactgctagctgtt
cccattgaagtgctcaaggaacagattgcagagagacggcatcgacaagtggtggaggaa
tctcaaagactgactgaacttatgaagagtggaatagattcagatcttctcgcagaagag
cagacagactcgggtgtggatggggatagtggggaagatgaagcatcttcacgactttgg
gtggatcagttctcaccacagcactacactgatctgctgagtgatgattttactaatcgc
tgtctgctgaaatggctgaagctctgggacactgtggtcttcgggcgagagaggaaaagc
cgtccggtccctgtagaggccagatcaaattttacaaacgctcaaaatcaaaaccaggcc
caacgtttcaaaaccaagtctcaaatgacagaagagatactagaggctgagctagaccag
tacaaaagaccgaaatttaaggtagcgctattatcaggtcctcctggactggggaaaacc
acactagcacacattattgcaaagcatgctggttacaatgtagtagaaatcaatgctagt
gatgaccgtagtgcagagctctttcagaagcgcattgatactgccacacagatgaagtct
gttctgggagccaatgaaaagcccaactgccttattatagatgaaatcgacggagctcct
gctgctgccattaatatcttattggccaccctgaaccggaaggacagcaaggatggagag
gaaacaggagtcaatgccttgaaaaagaaaaagaaaaagcaatctgtgctgcttagacca
atcatctgcatctgcaatgatctatatgttccagctctaaggccactgagacagcaagct
ttcctgctggtctttcctcagactctgccatcacgcttggctcaaagattagcagagatc
agcaggcgtcagggaatgaaagcagatacaggcactctgatggccctgtgtgagaaaact
gacaatgacatccgttcttgcatcaacacattacagtttttacacagtcgtggacagaag
cacttggaccagcgcagtgtcagctccatgtgtgtgggattgaaagaccaaaacaaggga
ctgttctcagtttggcaggagatctttcagcttcctcgactgaaaaggaagcggattggt
ggagatcctttcagtggttatgatgagttgggacctaaagagggtgcacaaaggcttcag
cacatcttacatttggtctcatctactggagaacatgagaaactcactcagggcctctat
gacaacttcctaagcatgaagctgaaggatcctgggatgttgggtgtttgctctggtctt
gactggctgtgtttctcagacttgctgaatgagtgtgtgttgcatggacagaactattcg
cttatgcgctacttccccttcctgcccgctgcctttcaccagctgtacgccgccacctct
gtcccgcgcatcaattatccacacagccactatgaggcctttaccaaaactcagcacatc
aggaacgccctgctcgccatgttgaacgacatcccacctgccatacagagccgtgtttgc
atgagctctctctgtctggacatcctcagccttctgctggagctcatctcccccaaactg
agaccggtgaaccctcagctttacagcaccagggagaagcagcagctctatgatctgatc
gacacaatgatcaactacaacctgacctacagacaggaccgaacgccagagggacagtac
acttatgtgctggagcctaatattgaagatgtggtgaattatcctggtttacctcctcgg
agacagttaacctatcaggtgaagcagctcatcgccagggagacggaactggagaggatg
aggagagtagagagagcacagcagagtcgaaacccacagaaaatggagaccgtaaataag
aatcaagaagaaaagaaaacagaagtgaagaaacagacaagcaggaaccatcaacagagg
ctggagaacatcgtaaaacagactgtggtggagaccaggcccgaattggacttttttgga
cgagccattgtacccaaggagaagcctgtggtcactgctacaagtgaagatggcaaagtg
agtggcgtgctgaacattggtaaagctgtgggaaacagcgacgtctggtttcgttttaat
gaaggtgtgtccaatgcagtgcgcagaaacgtttacattcgagagttgctgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (20)   
   RefSeq(nuc) (2)   
   GenBank (9)   
   EMBL (9)   
Protein domain (31)   
   Pfam (31)   
All databases (79)   

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