KEGG   Danio rerio (zebrafish): 555476
Entry
555476            CDS       T01004                                 
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
  KO
K19613  leucine-rich repeat protein SHOC2
Organism
dre  Danio rerio (zebrafish)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_1 LRR_9 LRR_5
Other DBs
NCBI-GeneID: 555476
NCBI-ProteinID: NP_001038251
ZFIN: ZDB-GENE-050208-523
Ensembl: ENSDARG00000040853
UniProt: Q1L8Y7
Position
22:complement(29591991..29644524)
AA seq 561 aa
MSSTLGKDKDSKEREPKAEGKSKTKGKDAKDGKKDTSGASPAVAFTLDSTIKRPNPPPST
RKKSSNAEVIKELNKCREENSMRLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPE
VGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRF
NRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT
QITNLDLQHNDLLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISV
LPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL
SKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLVSLEMLTLSNNLLKKLP
YGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGL
GENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIV
AGGPSFIIQFLKMQGPYRAMV
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgagcagtactctgggcaaagataaagactctaaggagagggaacccaaagctgaaggg
aaatccaaaaccaaagggaaagatgccaaagatgggaagaaagacacaagcggtgcttcg
cccgcggtggcctttaccttggacagcacgataaagcggcccaatccgccgcccagcacg
cgcaaaaaatccagcaatgccgaggtcatcaaggagctgaacaagtgccgcgaggagaat
tcgatgcgcctggatttgtccaagagatccatccatctgttgccctcgtccatcaaggag
ctgacccagctgaccgagctctacctgtacagcaacaagctgcaaagcctgccgcccgag
gtgggatgcctgtcaggattggtgacgctggcgctcagtgagaactctctgaccagccta
cctgactcgctggacaacctgaagaagctgcggatgctcgacctgcggcataacaagctg
cgggagatcccggctgtggtgtaccgcgtcagctccctcaccacactctacctgcgcttc
aaccgcatcaccaccgtagagaaggacatcaagaatctgtccaaactcacaatgctgagc
atccgagagaacaagattaaacagctgcccgcagagatcggtgagctctgtaacttgatc
acgctggatgtagcccacaaccagttggagcaccttcctaaagagattggaaattgcact
cagatcaccaaccttgacctgcagcacaatgatcttctcgatctgcctgagactataggt
aacttggcaagtataaaccgtctaggtttgaggtataaccgcctatcagcgatccctcga
tctttagcaaagtgcagagagctggaagagctcaaccttgaaaacaacaacatctcggtt
ttaccagaggggcttctctccagtctggtgaacctgacaagtctgacgctggcgcgaaac
tgtttccagtcttacccagtgggcggcccgtcccagttttccaccatctattctctcaac
atggagcacaaccgtatcaacaagatcccttttggcattttctctcgagcaaaagtgctt
agcaagctcaatatgaaggacaaccagctaacatctctgccactggattttgggacgtgg
accagtatggtggagttgaatctggcaacaaaccagcttactaagattccagaggacatc
tgcggccttgtgtctttagagatgcttacattgtccaacaacctgttgaaaaagttgcct
tatgggattggcaacttaaggaaactacgagagcttgatctggaggagaacaaactggag
tctctccctaatgagattgcctaccttaaggatctgcagaaactcgtattgaccaataat
cagctgacaactttgccgagaggaatcggtcacctgaccaacctgacgtacctgggcttg
ggagagaacctgctgcagcaccttcccgaggagatcggcacattggagaatctggaggac
ctgtacctgaatgacaaccccaacctgcacagtctgccattcgagctggcgctgtgcagc
aaactgtccatcatgagcatagagaactgcccgctcagccacctgccgccacagatcgtc
gccggaggcccttccttcatcatccagttcctcaagatgcagggcccctaccgcgccatg
gtctga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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