KEGG   Danio rerio (zebrafish): 556216
Entry
556216            CDS       T01004                                 
Symbol
fgd4a
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 4a isoform 1
  KO
K05723  FYVE, RhoGEF and PH domain containing 4
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:dre04990]
    556216 (fgd4a)
Domain-containing proteins not elsewhere classified [BR:dre04990]
 Pleckstrin homology (PH) domain-containing proteins
  Dbl-Like RhoGEF family proteins
   556216 (fgd4a)
SSDB
Motif
Pfam: RhoGEF PH FYVE FYVE_2 IQ_SEC7_PH PH_13 IBR zf-RING_UBOX
Other DBs
NCBI-GeneID: 556216
NCBI-ProteinID: NP_001171404
ZFIN: ZDB-GENE-050420-347
Ensembl: ENSDARG00000101471
UniProt: D5FS19
Position
18:12147971..12229516
AA seq 728 aa
MQEGGLDGAIGKGRVSNLISRFEENRHTDGRREGTPPKQVSRSPNCSPPRKNYQRPREQT
SDSSPHHALKPPNGVLAKMNRDRDKERDMEGVTHAPVPIARINKQGLLNGDSVDLTNREI
TEEECVDSPDVHLNQAKEEEEQEKRKVSEQSDIVRMNSIPEQKETNEQKLYKIANELLQT
EKAYVARLNLLDKVFYTKLMEEARKDTFPVDVVKSIFSNITSINAFHSQFLLPDLEKRMG
EWTSTPRIGDILQKLTPFLKMYAEYVRNFDHAMDLLKQWIDRSPPFKAIILDIQSQEVCG
NLTLQHHMLEPVQRVPRYEMLLKDYLKKLPPEHMDRRDAEKSLEIIGMAATHSNTAIRKT
ENLKKLLEIYEMLGEEEDIVNPSNELIKEGHILKLAARNTSAMDRYLFLFNNMLLYCVPK
FSLVGQKFTVRTRIGIEGMNVKETFNEDYPHTFQVSGKERTLELQASSKLDKESWIKAFT
ETIDISLQKNETFKSAIKDTEEASDLNISELGKRAPRWIRDNEVTMCMKCKEGFNAITRR
RHHCRACGYVVCWKCSDYKATLEYDGNKISKVCKHCYFILTGRTDSDDREGKKKGILEIE
AAQFCGSSIMCGFLQYCERNKPWQKVWCVIPEKEALVLYLYGAPQDVKAQSTIPLLGYHV
EDNPKATDPPASFRLSQSKSIHSFAAESEELKQRWLKVIRMAVTGEVPESPEENSSAEIT
EELNSNGN
NT seq 2187 nt   +upstreamnt  +downstreamnt
atgcaggagggaggattagacggagccatagggaagggcagggtgtccaacctcatcagt
cgctttgaggagaaccgtcacacagacggtcggagggagggaactccaccgaagcaggtc
agcagatctccaaactgcagcccgcctcgcaaaaactaccagagaccgagggagcagact
tcagactccagcccgcaccatgctttgaaaccccccaatggggtgctagccaaaatgaac
agagacagggacaaggaaagggacatggaaggagtaacacatgcccctgttccgatcgcg
aggattaacaaacagggactgctgaatggagatagcgttgatttaactaatagggaaatt
acggaagaggaatgtgtggattcgcctgatgttcacttaaaccaggccaaagaagaagaa
gaacaggagaagaggaaggtatcggagcagagcgacattgtgaggatgaacagcatccca
gagcagaaggaaaccaacgagcagaaactctacaaaattgcaaatgaacttctgcagaca
gagaaggcctacgttgcacgactgaacttattagataaggtgttttacaccaagctcatg
gaagaggcaagaaaagacacgttccctgtggatgtggtgaaaagcatattttccaacatc
acctccattaatgccttccacagccagttccttctgcctgacctggaaaaacggatggga
gaatggacgtcgacacctcgcattggagacatcctacagaagctcacgcccttcttgaag
atgtatgcagagtatgtgaggaactttgatcatgccatggatctgctgaagcagtggata
gatcgctcgcctccatttaaagctatcattctggatatacagagtcaggaagtgtgtggc
aatctgacgctgcagcaccacatgttggagccggttcagagagtgccacgatacgagatg
ctgcttaaagactatctgaagaaactccctccagagcacatggaccggcgggacgctgaa
aagtcattagagattattggcatggccgccactcattccaacactgccattcggaaaaca
gaaaacctgaagaagctgctggagatttatgagatgctgggagaagaggaggacattgta
aacccctcgaatgagttaataaaggagggtcacattctgaaactggcagccagaaacact
tcagccatggacagatatctcttcctgttcaacaacatgctgctgtactgcgttcccaag
ttcagccttgtgggacagaagttcactgtgcgcacacgtatcggcattgaaggcatgaat
gtgaaagagaccttcaatgaggactatcctcacacctttcaggtttctggaaaagaacga
acactggagctgcaggccagctctaaacttgataaagaaagctggataaaggcattcact
gaaacaatagacatctccctccagaagaatgagacctttaaatcagcaattaaggatacc
gaggaagcttcggatcttaatatatcagagctgggtaaaagagcccctcgctggatccga
gacaatgaagtgaccatgtgcatgaagtgcaaagaagggtttaacgccatcacacgcagg
cggcatcactgtcgggcctgtggatacgtggtttgctggaagtgctccgactacaaagct
actctggaatatgatggaaacaagattagcaaggtgtgcaaacactgttacttcatcctg
acaggccgtacagacagtgatgacagagaaggcaagaagaagggaatcctggagattgaa
gcggctcagttctgcggcagcagcatcatgtgtggcttcctgcagtactgtgaaaggaac
aagccgtggcagaaagtctggtgtgtcattcctgagaaagaagctctagttctctacttg
tacggagcacctcaggatgtcaaggcccagtccaccattccactgctaggctaccatgtg
gaggacaatccgaaagccactgaccctcctgccagcttcagactctcacagtccaaatcc
atccacagcttcgccgcagagagcgaggaactgaaacagcgctggctcaaagtcatccgt
atggcggtgacaggagaagttccagagtcgcctgaagaaaacagttctgcggaaatcaca
gaagagttaaactcaaacggcaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (52)   

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