KEGG   Danio rerio (zebrafish): 556493
Entry
556493            CDS       T01004                                 
Symbol
ncapd3
Name
(RefSeq) condensin-2 complex subunit D3
  KO
K11491  condensin-2 complex subunit D3
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dre03036]
    556493 (ncapd3)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Chromosome condensation proteins
   Condensin II
    556493 (ncapd3)
SSDB
Motif
Pfam: Cnd1 Cnd3 DUF3013 TFCD_C FANCI_S2 PBP_GOBP DUF5071
Other DBs
NCBI-GeneID: 556493
NCBI-ProteinID: NP_956624
ZFIN: ZDB-GENE-040426-737
Ensembl: ENSDARG00000034773
UniProt: Q7SZF2
Position
1:complement(21540453..21563040)
AA seq 1419 aa
MELIRALQLLKLSSVSTAWVDTVWDFEFTHTDPLDPVIEEEIKETPDVFKKVYMQLLPFS
NEDDDNNTENVWVVFGENGVSAKTLVAVLSYFILSAKTKSPSLEQRLCGLQAASLYLLLL
KIPGSVANKVYHQILFDTCLNMPLKCWPQESGKKRKKDSLKSSQGDPKTGKRSKPPKKVS
EEMEIDDDEEDEDEGMYFSAQDLLKLREGIVLLVRTLLRLLERFSLRDKPQSADSCVQLF
TELTNFEPVIGDLSFSQERNVDQLQSLPELSYHGLGLLCSTVHGEGDECRRRVFRKLLYV
ILMMKTQERSRPSLLAPSQAVCGARDQAILFISHIVDEQREATLPLLRILVQHICHQMVE
KSEYRASGSQAVGKLMAKMPCQDYAATIKWLYNYSRNNKVAFRMFALDVSMVLLEQTERD
VDDTVDPELAVFLSHRFLVHNIVYNHRNDVSPTVRGHALHCLAQCLELGSQNATKCVHEL
FSNSAHTMMESDRSEQTLKRRETGQKTALTFRTIELTKHKSMTTTHRSVMNTSLQNDESM
TLFKKHVSDPKTNARKSALETVMSLLKHGVIACSLENLSMLSDRCRDPAVSVKKKALQCL
MELLNALPDNKDVQEAWLRGVLPAVMDSESSVQEKALECMDHAIIAHIKSHKKNHNINVS
QKLAWDLLGLMCEKCQDLSRYFSKAFSVWAPQQKFTPAFVNNLLSHTEGERASAAWLLLA
KVASCSPKLNYGTVLDTWENIIRAPVVSVTMTCHILSVMGDIAFNINDDTKSRIVDDLMG
WLKTFSLPSEVISSCVDALVRFGRSDDTQETLRFMDRFCGELVAVCEKYLSSVLLQEKGT
ENINEDLLVKHLYTLGVASLHCPSKVGKRIFLLVQSILTPLEHPVSAEGDGLPASQPLSQ
FKPTSMPTVVRAHAVITLGKLCLQHEDLMMKYLPVFARELEVGTELAVRSNVVVVMCDLC
VRYTNTVTRYIPNISACLRDEEPIVREQTLIMLTNLLQEEYVKWKGPLFFRFAVVLVDPD
PAIADLCEYCLVDLLLKKSPLMFSQHFIECIFHFNSYEKHKKYNKFTQTEREKSRFSLKG
PQNQGRRFRIYRFLLKNFTDEQRFNITSKICQDVLASFVDSELPLDSEGSELLADTFDIL
SLKEMKLTAMSGPAAGEEAQEDEMALAKAVLQVAQKKLVSQVQKRNFVENVIPIIISLKN
MLEEQHSPVLKHLMAYLQVTMQDYRSEVKELFAADEQLAAEVEYNLKQFEKQKQQQEQLQ
MENQLANFTMSPRQNENAVASPAQAANGGRQTPKGGFATPLNRHANKGPGQTPKSADPLR
RRTYAGIVTPVRSHLSPTVFSTGRGKQVGRAISTPQASINEVTFGEQVSAICNDSRRVSK
GEEEENVLHLMSPEQKKPVPRQWNVESPLVQKQRAKKRL
NT seq 4260 nt   +upstreamnt  +downstreamnt
atggagttgatacgcgctttgcagttattaaaactgagcagcgtgtctacagcctgggtg
gatacagtgtgggatttcgagttcacccacacagaccctcttgaccctgttattgaggag
gaaataaaggaaaccccagatgtcttcaagaaggtgtacatgcagctgcttcccttctcc
aatgaggatgatgacaacaacacagaaaatgtgtgggtggtgtttggtgagaacggtgtc
tctgcaaaaactctggtggctgtcttgtcttacttcatccttagtgctaaaaccaaaagt
cccagtcttgaacagagactttgtggtctccaggcagcatctctgtacttgttactgctg
aaaataccagggagtgttgcgaacaaagtctaccatcaaatcctgtttgatacatgtctg
aacatgcccctaaaatgctggcctcaagaatctggcaagaaacgcaagaaagattccctg
aaaagctctcaaggtgaccccaaaactgggaaacgatccaaacctccaaagaaagtgtca
gaagagatggagattgatgatgatgaagaggatgaagatgaggggatgtacttttctgca
caggatttgctgaagctaagagagggaattgtgttgcttgttcgtacacttctgagactc
ttagagagattttcacttcgcgacaaacctcagagtgccgacagctgtgttcagcttttc
actgaacttacaaactttgaaccagtcattggagatttgtcattctctcaggaaaggaat
gttgaccaattacagagtctccctgagctgtcctatcatggactggggttgctttgctct
actgttcatggtgaaggtgatgagtgccgtcgcagagtgtttcgcaagctactttatgtg
attctaatgatgaaaacacaagagaggtccaggccaagtcttcttgctccatctcaggct
gtctgtggtgcaagagaccaggccattcttttcattagtcacattgttgatgagcagaga
gaggccacattgccacttttacggattcttgtgcaacacatttgtcatcagatggtggag
aagtcggaatatcgagccagtggatctcaagccgttggaaagctgatggctaagatgcca
tgtcaggactacgcagccaccattaagtggctctataactactctcgaaacaacaaggtg
gcattcagaatgtttgcgctggatgtttccatggtcctgctggagcagactgagagagat
gtggatgacactgtggaccctgagctggctgtgttcctctcacataggttcctggtgcat
aacattgtatacaatcatcgtaatgacgtctcccccacagtcagaggtcatgcattgcac
tgcctggcacagtgtctggagctgggttcccagaatgccacaaaatgtgtccatgagctc
ttttccaacagtgctcatactatgatggaatcagaccgctctgagcaaactctgaagaga
agagagactggtcaaaaaacagcactgactttcagaaccatcgagctcacaaaacacaag
agcatgaccacaacccacaggagcgttatgaatacttctttacagaatgatgaaagtatg
actctgtttaaaaagcatgtcagcgatccaaaaaccaatgctagaaaaagtgcactggag
actgtcatgagtctgctaaagcacggagtgatcgcatgcagtttggagaatctgagtatg
ctgtcagatcgctgcagggatcctgctgtctcagtgaagaagaaagccttgcagtgcctt
atggaacttcttaatgctcttcctgacaataaagatgtgcaggaggcctggctgagagga
gtgctaccagctgtcatggactctgaaagctctgtgcaggagaaagctctggagtgtatg
gatcacgccatcatcgctcacattaagagtcacaagaaaaatcacaatattaatgtctct
caaaagctagcttgggacttactgggactgatgtgtgaaaagtgtcaagatcttagccgg
tatttcagtaaggcgttcagcgtgtgggcaccacagcaaaagttcactccggcctttgtg
aataatttgctgtctcacacagagggagagagggcttctgctgcctggttactgttagct
aaagttgccagctgctctcctaaactgaactacggcactgtgctggatacctgggagaac
attatcagggcgccggttgtttcagtaacaatgacctgccatattttgagcgttatgggt
gacattgcctttaatattaatgatgacaccaagagcagaatagtagatgatctgatgggc
tggttaaagacattcagcctgccttcggaggtgatcagctcctgtgtggatgctctggtc
agatttggaagatcagatgacactcaggaaacactgaggttcatggatcgtttctgtgga
gagctggtcgctgtatgtgagaaatatctgtctagtgtccttctgcaggagaagggaact
gagaacatcaacgaagacctgctggtcaagcatctttatacacttggcgtcgcttctctc
cattgcccttcaaaagtggggaagagaattttccttctggttcagtctattctaacaccc
ttagagcatccagtttctgctgaaggagatggcctgcccgctagtcagcctttatctcag
ttcaaacccacttccatgccgacagtggtcagggcacatgctgtcatcacattaggaaaa
ctgtgtctgcagcatgaggatctgatgatgaagtatctccctgtgtttgcccgtgagctg
gaagtgggcacagagctggccgtgcgcagtaatgtggtggtggtgatgtgtgatctttgc
gttcgctacaccaatacagtgactcggtacatcccaaacatctcagcctgtctgagagat
gaagagcccatcgtccgagagcagactcttattatgctcaccaacttactgcaggaggag
tatgtgaagtggaaaggtccattgtttttccgtttcgctgttgttcttgtggacccagat
cctgcaattgcagatctctgcgagtactgcctggtggacctcctgcttaagaagagtcct
ctcatgttttcccagcatttcatcgagtgcattttccacttcaactcctatgagaaacac
aagaaatataataagttcactcaaactgagagagagaaaagcaggttttcactgaaagga
ccgcagaatcaaggcaggcgtttccggatttacagattcctgttgaaaaactttactgat
gagcaacgcttcaatatcacaagcaaaatctgccaggatgtccttgcaagctttgtggac
tccgagctgcctctggactctgagggctccgagttgcttgcagatacatttgacatcctg
tccctgaaagagatgaaactgacagccatgagtggcccagcagctggagaagaggctcag
gaggatgagatggccctggctaaagcggtcttacaggtggctcagaaaaagctggtctca
caggttcaaaagaggaactttgttgagaatgttattcctattatcatcagtctgaagaac
atgctggaagagcaacactcacctgtcctgaaacaccttatggcttatttgcaggtcacc
atgcaggactatcgttcagaagtgaaggagctgtttgctgctgatgagcagttggctgct
gaggtggagtataacctgaagcagtttgaaaagcaaaaacaacaacaagagcaactgcag
atggagaaccaactggccaactttacaatgtcgcccagacaaaatgaaaatgctgtggct
tctcctgcccaggcagcaaatggtggtaggcagacaccaaagggaggttttgccacccct
ctaaatcgtcatgctaataaaggacctggacaaacccctaaatctgctgatcctctgagg
cgccgtacttatgcaggaattgttactccagtcaggagtcatttatcccctacagtgttt
tcaacaggacgaggaaagcaggttggcagagccattagtactccgcaagcgagcatcaat
gaagtgacttttggagagcaggtcagcgccatctgcaatgattctagaagagtcagcaaa
ggtgaggaagaagagaatgttctgcatctcatgtctccagagcaaaaaaaaccggtgcct
aggcagtggaatgttgaatcccctctggtacaaaaacagagagccaagaaacgcctgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (51)   
   KEGG ORTHOLOGY (1)   
   RefGene (45)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (68)   

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