KEGG   Danio rerio (zebrafish): 557717
Entry
557717            CDS       T01004                                 
Symbol
stxbp1b
Name
(RefSeq) syntaxin-binding protein 1b
  KO
K15292  syntaxin-binding protein 1
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    557717 (stxbp1b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    557717 (stxbp1b)
Membrane trafficking [BR:dre04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    557717 (stxbp1b)
 SNARE
  SNARE associated proteins
   Syntaxin-binding proteins
    557717 (stxbp1b)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   557717 (stxbp1b)
SSDB
Motif
Pfam: Sec1 YlbD_coat SGT1 FRB_dom
Other DBs
NCBI-GeneID: 557717
NCBI-ProteinID: NP_001082845
ZFIN: ZDB-GENE-060531-166
Ensembl: ENSDARG00000056036
UniProt: A2BGE0
Position
5:28973264..28999899
AA seq 605 aa
MASLGLKAIVGEKIMNDVIRKVKKKGEWKVLVVDKLSMRMVSSCCKMTDIMSEGITIVED
ITKKREPLPTMEAIFLITPSDESVEGLINDFRDPRNPIYRGAHVFFTDAIPDSLFNLLSK
SRASKSIKTLTEIHIAFLPYESQVFSVDKSDAFQDFYSPFKADVKNQVLERLAEQIATLC
ATLKEYPAVRYRGEYKDNAVLAQMLQDKLDGYKADDPTLGEGPDKARSQLLILDRGFDPV
SPLLHELTFQAMAYDLLPIENDVYMYETSGMGDTRMKEVLLDEDDDLWMTLRHKHIAEVS
TAVTKSLKDFSASKKMNTGEKTTMKELSQMLKKMPQYQKELSKYSTHLHLAEDCMKQYQG
TVDKLCRVEQDLAMGTDAEGEKIKDPMRAIVPILLDATVTIMDKIRIILLYIFLKNGVSE
ENLCKLLQHAQIPPEDSDIISNMAHMGVPIISEQATTRKGKKSDRKERISEQTYQLSRWT
PLVKDIMEDAIEDKLDPKQYPYISTRTVSSKTTTATSARYGNWHKNKSPGEIRNGPRIIV
FIVGGVTYSEMRCVYEVTQANGKWEALIGSTHTITPVKYLKHLQHADFLDPNAAPEDQLP
AEEDK
NT seq 1818 nt   +upstreamnt  +downstreamnt
atggcatctctgggactcaaggcgattgtcggagaaaaaattatgaacgatgtcattagg
aaggtgaagaagaagggagaatggaaggttttggtggtggacaagctcagcatgagaatg
gtctcatcctgctgtaaaatgaccgacatcatgtctgaagggatcacaatcgtggaagac
ataacaaagaaacgtgagcctcttcctacaatggaggccatatttctcatcactccatct
gatgagtcagtcgagggactcatcaatgacttcagagatcctcgtaatcccatatacaga
ggggcacatgtcttcttcactgatgcaattccagactccttgttcaacttgctaagtaaa
tcccgtgcctctaaatccatcaagacgctgactgagattcacatcgccttcctgccctac
gaatcacaggtgttttcagtggacaaatcagatgccttccaggatttctacagcccgttt
aaagctgatgtaaagaaccaggtgctggagcgcttagccgagcaaatagccaccttgtgc
gccacgctgaaagagtacccagctgttagatacagaggagagtacaaggacaatgcagtc
ctggcccagatgcttcaggataaactggacggctataaagcggatgaccccactttggga
gagggacccgataaagcacgttcccagctactgattttggatcgtggctttgaccctgtt
tcgccacttctgcacgagctcacgtttcaggccatggcatatgacctgctgcccattgag
aatgatgtctacatgtatgaaaccagtggtatgggtgacactcgtatgaaagaggtgctt
ctggatgaagatgatgacctttggatgacactgagacataaacacatagcagaggtgtcc
acagctgtgactaaatcgttaaaggacttctccgcaagcaaaaagatgaacacaggagag
aagaccaccatgaaagagctctcccagatgcttaaaaagatgccacagtaccagaaagag
ttaagcaagtactcaactcatctgcacttagcagaagactgcatgaagcagtaccagggc
acagtggacaaactgtgtcgtgttgagcaggatctagctatgggcacagatgcggagggt
gagaagattaaagatcccatgagagccattgtacccattctactggacgctactgtcacc
atcatggacaagatccgcatcatcctgctctatattttcctcaagaatggtgtgtcagaa
gaaaatctctgtaagctcctgcagcatgctcagatccctccagaggacagtgacatcatc
tccaacatggctcatatgggggttcccattatttcagagcaagcaaccacacgcaaaggg
aagaaatctgaccgcaaggaaaggatcagtgagcaaacgtaccagctctcccgatggaca
cctctggtcaaagacatcatggaggatgccattgaagataaactcgacccgaaacagtac
ccttacatctccacacgaacagtgtcctcaaaaaccaccacagcgaccagtgcccgttat
ggaaactggcataagaacaaaagccctggtgagatccgcaacggcccacgcatcatcgtc
ttcatagtcggcggcgtgacctacagcgagatgcgctgcgtctatgaggtcacgcaggcc
aacggcaaatgggaagctcttatcggctccacacacaccatcactcctgttaaatacctg
aagcatctgcagcatgcagactttctggaccccaatgcagcccctgaggaccagctccct
gctgaagaagacaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (4)   
   Pfam (4)   
All databases (38)   

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