KEGG   Danio rerio (zebrafish): 557928
Entry
557928            CDS       T01004                                 
Symbol
lrrc8ab
Name
(RefSeq) volume-regulated anion channel subunit LRRC8A
  KO
K22038  volume-regulated anion channel
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:dre04040]
    557928 (lrrc8ab)
Ion channels [BR:dre04040]
 Chloride channels
  Chloride channel, volume-regulated (VRAC)
   557928 (lrrc8ab)
SSDB
Motif
Pfam: Pannexin_like LRR_8 LRR_4 LRR_1 LRR_5 Sp-CxC LRR_6
Other DBs
NCBI-GeneID: 557928
NCBI-ProteinID: XP_005165659
ZFIN: ZDB-GENE-060531-43
Ensembl: ENSDARG00000052155
UniProt: A2BF98
Position
5:64840530..64848844
AA seq 796 aa
MIPITELRYFVDTQPTYRILKPWWDVFTDYLSVIMLMIAVFGGTLQVTQDKMICLPCKWV
VNKTCRKYFNATFSVPLALEPQGIQYDLDRHQYNYVDAVCYENRLHWFAKYFPYLVLLHT
LIFLACSNFWFKFPWTSSKLEHFVSILLKCFDSPWTTRALSETVVEESDPKCLVKMNGSF
DKKASYVSEDVEASVPMLSTTRSRIEQGIVDHSETGVLDKKEGEQAKALFEKVKKFRIHV
EEGDIVYRLYIRQTIIKVVKFILIICYTGYYVHNIQFNVDCNVDIESLTGYRMYNCAHPL
ATLFKILACFYISLVIVYGMICVYTLSWMLRRSLKKYSFESIREESSYSDIPDVKNDFAF
MLHMIDQYDPLYSKRFAVFLSEVSENKLRQLNLNNEWTLEKLRQRITKNSQEKLELHLFM
LSGIPDTVFDLVELEVLKLELIPDVTIPPIIAQLTNLREMWLYHTPAKIEAPALAFLREN
LKSLHIKFTDIKEIPLWIYSLKNLSELHLTGNLSADNNRYIVIDGLRELKRLKVLRLKSN
LTKLPQVVTDVGMHLQKLSINNEGTKLMVLNSLKKMVNLSELELVRCDLERIPHSIFSLH
NLQEIDLKDNNLKTIEEIISFQHLHRLVCLKLWYNQIAYIPIQIGTLVNLERLYLNRNKI
EKMPHQLFFCRKMRFLDLSHNNLTDIPSEIGTLQNLQYLAVTANRIESLPPELFQCKKLR
TLNLGNNCLQSLPSRFGELTSLTQLELRGNRLECLPVELGECRLLKRSGLIVEDSIFNTL
PPEVKEQLWRTDKEAS
NT seq 2391 nt   +upstreamnt  +downstreamnt
atgatccccataactgagctacgctattttgtggacacgcaacctacatatcgcatccta
aagccatggtgggacgtgttcaccgactatttatccgtcataatgctgatgatcgcagtg
ttcgggggaactcttcaggtcacgcaggacaagatgatctgtctgccctgcaaatgggta
gttaacaagacctgtagaaagtatttcaacgcaaccttttccgtgccattggctcttgag
cctcaaggaatccagtacgacctcgatcgccaccagtataactatgtcgacgctgtgtgc
tatgaaaacaggcttcactggttcgctaagtatttcccgtatttagtgttgctgcataca
ctcatctttctggcttgcagcaacttctggttcaagttcccttggacgagctctaaactg
gagcatttcgtgtctatcctactcaagtgttttgactcaccgtggaccacaagagctctc
tctgaaaccgtagtagaggaaagcgaccccaagtgtctggtgaaaatgaacggtagcttt
gataagaaggcttcgtatgttagcgaggacgtcgaggccagcgttcccatgctgtccaca
acaagatctcgtattgaacaaggaatcgtggaccactctgaaactggagtcctagacaaa
aaggaaggggaacaagcgaaagcgttgttcgagaaggtgaagaaatttcgaattcacgtt
gaggaaggtgatatcgtctaccgactctacatccgacagaccatcatcaaagttgtcaag
tttatcctgatcatctgctataccggctactatgtccacaatattcagttcaatgtagac
tgcaatgtggacatcgaaagtctcaccggttatcgcatgtacaactgcgcccatcccttg
gccactctctttaagatccttgcctgcttttacattagcctagtgattgtgtatggcatg
atctgcgtgtacaccctcagctggatgctccggcgctccctcaagaagtactcgtttgag
tcgattcgagaagaaagcagttatagtgacatcccagatgtgaagaacgactttgctttc
atgctgcacatgattgaccagtacgacccgctctattccaaaaggtttgccgtgttcctc
tcggaggttagtgagaacaaacttcgccagttgaatctcaacaatgaatggactttggaa
aagcttcggcagaggatcaccaaaaactcccaagagaagctggagctccatttattcatg
ctgagcgggattccagatacggttttcgatttggtggagttggaggttctgaaactcgag
cttattcctgacgtcaccatcccaccaatcattgcccaacttacgaacctccgagagatg
tggctgtaccacacaccagccaaaatagaggctccagctctggcgtttctcagagagaac
ctgaaatctctgcacatcaagtttaccgacataaaggagatccctttatggatctacagc
ttgaagaatttaagtgagttgcatctcactgggaatcttagtgcagacaacaaccgctac
atcgtcattgatggtctacgagagctgaagcggctcaaggttttaagactcaaaagtaac
cttacaaagctgcctcaggtggttacagatgttggcatgcaccttcagaaattgtccata
aacaatgaaggcaccaaactgatggtgcttaacagcttgaagaagatggtgaacctatca
gagctggaacttgtccgctgcgatcttgagcggataccgcattcaatcttcagcttgcac
aatttacaagagattgatctaaaggacaacaacctgaaaaccattgaggagatcattagt
tttcagcatctccatcgacttgtttgcttgaagttgtggtataaccagattgcatacata
cctatccaaataggtactttggtcaacttggagcgcctctatttgaaccgcaacaagatc
gagaagatgccacatcagctgttcttctgccggaagatgagatttcttgatctgagccat
aataatctgactgacatcccatcagaaataggaactctacaaaacctgcaataccttgct
gtaactgccaacagaattgagtctctcccccctgagctgtttcagtgtaagaagctgcgc
acgctgaacctgggaaacaactgtctgcagtctctgccctctcgtttcggggagctcacc
agcctgacgcagctggagctcaggggcaaccggctggagtgccttcctgtggagctgggc
gagtgccgactgctgaagaggagcggacttattgtggaggacagcatcttcaacacttta
cctccagaggtcaaggagcagctgtggaggactgacaaagaggcgtcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (34)   

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