KEGG   Danio rerio (zebrafish): 558065
Entry
558065            CDS       T01004                                 
Symbol
plxna1b
Name
(RefSeq) plexin-A1b
  KO
K06820  plexin A
Organism
dre  Danio rerio (zebrafish)
SSDB
Motif
Pfam: Plexin_cytopl TIG Plexin_RBD TIG_2 TIG_plexin Sema PSI PSI_integrin
Other DBs
NCBI-GeneID: 558065
NCBI-ProteinID: NP_001103480
ZFIN: ZDB-GENE-061007-1
UniProt: A8IYK2
Position
6:complement(1285832..1432200)
AA seq 1885 aa
MWPPQGPQCIISPKTVVLLGLLTICNSPHHSEGALEPFRSFTPPDWGLTHLAIHNKTGDV
YVGAVNWIYKLSSNLTKLRSHVTGPVVDNEKCYPPPSVQSCPHDLSPNSNVNKLLLIDYP
QNRLIACGSTSQGICQFLRLDDLFKLGEPHHRKEHYLSSVVESGTMSGVIISEGHLSKLF
IGTPIDGKSEYFPTLSSRKLMANEEDADMFSFVHQDEFVSSQLKIPSDTLSKFPAFDIYY
IYSFSSEQFVYYLTLQLDTQLTSPDASGEQFFTSKIVRLCIDDPRFYSYVEFPIGCTKDG
VEYRLIQDAYLSKPGRQLANSLGVSEQEDILFTVFSQGQKNRVKPPRESALCLFTLTKIK
EKIKERIQSCYRGEGRLSLPWLLNKELPCINSPLQIDDNFCGQDFNQPLGGTKTIEGTPL
FIDKDDGMTSVAAYDYRGNTVVFAGTRNGRMKKILINSVSPSRPALLYESVAVSEGSPLL
RDMLFSPDLQFIYTLTDKQVTRVPVERCSQYSTCSECLSSRDPHCGWCVLHNICSRRDRC
ERADEPQRFASRVDQCVELTVQPNNISVTMAEVQLVLQARNVPDLSAGVDCSFEDYTQTE
GTIHGSRIYCLSPTAKELVPITRLQRDTHVLKLYLKSRETGQKFASVDFTFYNCSIHRSC
LSCVNGSFPCHWCKYRHLCTQNANDCSFQEGRVNMSEDCPQILPSTEIYIPVGVPKPITL
SARNLPQPQSGQRNYECVFHIQGETHSVTALRFNSSSIQCQKTTYNYEGSDISDLPVDLS
VVWNGNFIIDNPYNIQAHLYKCYALRESCGLCLKADPSFECGWCVQDRKCSLRQECAQPE
NTWMHATAGNSRCTHPRITKLSPETGPRQGGTRLTISGENLGLQFKDIQNGVRIGKVSCQ
PIEEEYISAEQIVCRLADATGYRVQEAHVEVCVRDCLQDYRAVSPKVFTFVSPYFTRVVP
SYGPISGGTRITIYGSHLNAGSAVSIKIGLNTCQFERRSAREIVCVTPAGLGSGGTPVMV
DINAAELRNPEVKFNYTDDPTILKIEPDWSIASGGTPLTVTGVNLATVREPKMRAKYGTI
SSVNNCTVLNNTVMVCAVPSVAGSERGFSEVGNAPDEIGFIMDHVQMLLVVNESFSFYPD
PVFEAFGPAMLELKPGSPLILKGKNLIPSAAGNYRLNYTVLIGDKQCVLTVSETQLLCES
PNLTGQHKVTVLAGGFRFSPGTLQIYSDSLLTLPAIIGIGGGGGLLLLVIIIILIAYKRK
SRDADRTLKRLQMQMHNLESRVALECKEAFAELQTDIHELTQDLDGSGIPFLDYRTYAMR
VLFPGIEDHPVLKEMEVPANVEKALTLFGQLLNKKHFLLTFIRTLEAQRSFSMRDRGNVA
SLIMSGLQGEMEYATGVLKQLLADLIDKNLESKNHPKLLLRRTESVAEKMLTNWFTFLLY
KFLKECAGEPLFMLYCAIKQQMEKGPIDSITGEARYSLSEDKLIRQQIDYKTLTLHCINP
ENENAAEVMVKCLNCDTVTQVKEKLLDAVFKGTPYSQRPKVGDMDLEWRQGRMARIILQD
EDVTTKIDNDWKRLNTLAHYQVTDGSLIALVPKQNSAYNISNSSTFTKSLSRYESMLRTS
SPDSLRSRTPMITPDLESGTKLWHLVKNHDHTDQREVDRGSKMVSEIYLTRLLATKGTLQ
KFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADRHMISDPDVRHTWKSNCLPLRFWV
NVIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHKLGKDSPSNKLLYAKDIPNYKN
WVERYYSDISRMSAISDQDMSAYLAEQSRLHLNQFNSMSALHEIFSYITKYKDEILSALE
RDEQSRRQRLRAKLEQVIDTMALPS
NT seq 5658 nt   +upstreamnt  +downstreamnt
atgtggccaccacagggtccgcagtgcattattagcccaaagactgtagttctccttggg
cttctgactatctgcaattccccacatcattctgaaggagcactggagccatttaggtcc
ttcacacctccagattggggtctgacacatttagccattcacaataagacaggagatgtg
tatgtcggtgcggtaaactggatctacaagctttctagcaacttgaccaaattgagaagt
cacgtaacgggtccagttgtggacaatgagaaatgctatccgcctccgagtgtacagtca
tgcccccatgatctttccccgaatagcaatgtgaacaagctgctgctaatagactatccc
caaaacagactcattgcctgtggaagtacctcgcaagggatctgtcagtttctgcgcctg
gatgatctctttaagctcggcgagccacaccaccggaaggaacactacctttctagtgtg
gtcgaatcaggaaccatgtctggggtcatcatttctgagggtcacctcagcaagcttttc
atcggcacacctattgatggaaaatccgagtacttcccgacactctccagccggaagctg
atggccaatgaggaggatgccgacatgttcagcttcgtccatcaggatgagtttgtctcc
tctcaattaaagatcccttcggatacgctgtccaaattcccagcgttcgatatctactat
atttacagctttagcagtgagcagttcgtctactacctgaccttgcagctggatacccag
ctaacgtctcctgacgcaagcggagagcagttcttcacatccaagattgttcgactttgt
attgatgatcccaggttttactcctatgtggaatttccaatcggatgtactaaggatggt
gtggagtatcgactaatccaggatgcctacttaagcaaacccggaaggcaacttgcaaac
tccttgggagtatccgagcaggaggatatattgtttacggtcttctctcaaggtcagaag
aaccgagtcaaacctccaagagagtcagcgctctgcctgtttactcttacgaaaatcaag
gagaagatcaaggaaaggatccagtcatgctatagaggagagggcaggctgtctttgccc
tggttgctcaacaaggagctaccatgcatcaattcgcctctccagatcgatgataatttc
tgcgggcaggattttaaccagcctctagggggcaccaagaccatcgagggcacgccgctc
ttcattgacaaagatgacgggatgacttctgtcgctgcgtacgattatcggggaaacaca
gtggttttcgcaggaacacgaaacggcagaatgaagaagattctgattaattcggtgagt
ccgtcccgaccggcgctgctgtacgagagtgtggccgtcagcgagggaagtccactgctc
agagacatgctgttcagtccagacctgcagttcatctacacactcactgacaaacaggtg
acgcgtgtgccggtggagagatgctctcagtactcgacctgctctgagtgtctgagctcc
agagaccctcactgcggctggtgtgtccttcacaacatttgttctcgtcgtgatcgctgt
gagcgtgctgatgaaccacagagattcgcttccagagtggatcagtgtgtggagctgacg
gtgcagccaaacaacatctccgtcaccatggctgaagtacagctggtccttcaggcccga
aacgttccggatctgtccgccggggtggactgctccttcgaggattacacccagactgaa
ggaacaatacacggatcccgaatctactgcctctcacccacagccaaagaactggtgccc
atcacacgcctgcagagagacactcatgtgctgaagctctacctcaaatctcgggaaacg
ggccagaaattcgccagtgtggatttcaccttctacaactgcagcatccacagatcgtgt
ttgtcgtgtgtgaacggctcttttccatgccactggtgtaaatacagacatctgtgcact
cagaacgcaaacgactgctcctttcaagagggacgagtgaacatgtctgaggactgtcct
cagatcctgccgtccacagagatatacattcccgtgggcgtccccaagccgatcacactg
tcggcccggaaccttccgcagcctcagtccggacagaggaactacgagtgtgtgttccac
atccagggggaaacacacagcgtgacggcgctgcgcttcaacagctccagcatacagtgc
cagaaaaccacatataactatgaaggaagtgacatcagcgaccttcctgttgatctgtcc
gtggtctggaatggaaacttcatcatcgacaacccttacaacatacaagcgcacctgtac
aagtgttatgcactgagagagagctgtggattgtgtctgaaggccgacccgagcttcgag
tgcggctggtgtgttcaggacagaaagtgttctctgcggcaggaatgtgctcagccggaa
aacacatggatgcacgccactgccggaaacagccgctgcacacacccgcgcatcaccaag
ctgtctcctgaaaccggcccgcggcagggcggaaccagactgaccatcagcggagagaat
ctgggccttcagtttaaagacatccagaacggggtgcgcatcgggaaagtgtcctgccaa
cctatcgaggaggagtacatcagtgctgagcagatcgtgtgccgtctggccgatgccaca
ggttatcgggtgcaggaggctcatgtggaagtgtgtgtgcgcgactgtctgcaggactac
agggcggtttctccaaaagtcttcacgtttgtgtctccgtacttcacccgtgtggtgccg
tcatatgggccgatttctggaggaacgaggatcactatttacggcagtcatctgaacgca
ggcagcgccgtttccatcaagatcggactcaacacttgccaattcgagaggcggagcgcc
cgtgagatcgtgtgtgtgactccagcaggtttgggttcaggcgggactccagtgatggtg
gatataaacgcagccgagctcagaaacccggaggtgaagttcaactacactgatgatccc
actatcctgaagatagagcccgactggagcatcgccagtggaggaactccgttaacagtc
accggcgtcaacctggccaccgtcagagagcccaagatgagggccaaatacggcaccatc
agctcagtcaataactgcacggtgctcaataacacagtgatggtgtgtgcggtgccgtcg
gtggccggctctgagaggggtttttcggaggtgggcaacgcaccggatgagatcggcttc
atcatggatcatgtgcagatgctgctggtggtcaacgagagcttcagtttctatcctgat
ccggtatttgaggccttcggtccggccatgctggagctcaaaccaggatctccactcata
ctgaagggcaagaatctgatcccgtcggctgctgggaactacaggctgaactacaccgtt
ctgatcggggataaacagtgtgtgttaaccgtctcagagactcagctgctgtgtgaatct
ccaaacctcaccggacaacataaagtcactgttctggctggaggtttccgcttctctccg
ggaactctgcagatttactcggacagtctgctgacgctgccggccatcatcggcatcggt
ggaggtggaggtcttcttctgctggtcatcatcatcatcctcatcgcttacaagcgcaaa
tctcgagacgccgaccggacgctcaaacgcctgcagatgcagatgcacaacctggagtcc
agagtggccctggagtgcaaagaggcatttgcagagctgcagactgatatccatgagctg
actcaggatctggatggatctggcatcccgttcctggattaccgcacttacgccatgaga
gtgcttttccctgggatcgaggaccatccggtgctgaaggagatggaggttccggccaac
gtggagaaggctttgactctgttcgggcagctgctgaataagaagcatttcttgctgacc
ttcatccgcacgctggaggctcagcgctcgttctccatgcgggaccgtgggaacgtggca
tccctcatcatgagcggcctgcagggggagatggagtacgccactggggtcctgaaacag
ctgctggcagacctcatcgacaagaacctggagagcaaaaaccaccccaaactcctgttg
cggaggactgaatccgtggctgagaagatgctaacaaactggtttactttcctgctctac
aagtttcttaaggagtgtgccggcgagcctctcttcatgctgtactgtgccataaagcag
cagatggagaaaggaccgatcgactccatcactggagaagccagatactcactgagtgaa
gacaaactcatccgacagcagatcgactacaaaacactgacgctgcactgcattaaccct
gagaatgagaacgcagccgaggtgatggtgaaatgcctgaactgcgacaccgtcacgcag
gtcaaagagaagctgctggacgccgtctttaagggcacgccgtactcacagcggcccaaa
gtcggagacatggatctcgagtggcgtcagggtcgaatggctcgtattattctccaggac
gaggatgtcaccaccaaaatcgacaacgactggaagcgtctcaatactctggcacactat
caggtaacagacgggtcactgatcgcattggttcccaagcaaaactccgcctacaacatc
tccaactcctcaacgttcaccaaatccctcagcagatacgagagtatgctgaggaccagc
agtcctgacagcctgcgctctcggacccccatgattaccccggacctggagagcggaacc
aagctctggcatctggtgaagaaccacgaccacacggaccagcgggaggtggaccgcggc
agcaagatggtgtccgagatctacctgactcgcctgctcgccaccaaggggacgctgcag
aagtttgtagacgacctgtttgagaccatcttcagcacggctcaccgcggcagcgctctt
cctctggccatcaaatacatgttcgacttcttagacgagcaggcggacagacacatgatc
tcagaccccgacgtcagacacacgtggaagagcaactgtctgccgctcaggttctgggtg
aacgtgatcaagaatcctcagtttgtgttcgacattcataagaacagcattaccgacgcg
tgtctgtccgtggtggcgcagaccttcatggactcctgctccacatctgaacacaagctg
ggcaaagattcgccctccaacaagctgctctacgctaaagacattcccaactacaagaac
tgggtggagaggtattactctgatatatcgcggatgtctgcgatcagtgatcaggatatg
agcgcgtatctggctgaacagtcgcgtctgcatctgaatcagttcaacagcatgagcgcg
ctgcacgaaatcttctcctacatcaccaaatacaaggacgagatcttgtctgcgctggag
agagacgaacagtcccgccggcagagactgagggctaaactggagcaggtgatcgacacc
atggctttacccagctga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (40)   

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