KEGG   Danio rerio (zebrafish): 558456
Entry
558456            CDS       T01004                                 
Symbol
jarid2b
Name
(RefSeq) protein Jumonji
  KO
K11478  protein Jumonji
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    558456 (jarid2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dre03036]
    558456 (jarid2b)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    558456 (jarid2b)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.2
     558456 (jarid2b)
SSDB
Motif
Pfam: JmjC ARID JmjN zf-C5HC2
Other DBs
NCBI-GeneID: 558456
NCBI-ProteinID: NP_001189388
ZFIN: ZDB-GENE-060503-246
Ensembl: ENSDARG00000062268
UniProt: Q1LVC2
Position
19:25970959..26158786
AA seq 1319 aa
MSKERPKRNIIQKKYDDNDGMPWSEERVVRKVLYLSLKEFKSAQKRQLCDGIDDEGKGPN
ASLSNGQLNGSKGGHKEDGSRSQRKDGGGEYSVDGPAKKRPRLHAQRKFAQSQPNSPSNT
PVKMADPSLPTPLTHITFLSRRKPKTEDFLTFICLRGSPALPSNMAYFGCSQDEEDLEDE
DEIEEEKAPSVASTSCQSTPKKGKPHGKINGLVLNGHKVHKDKELTPRSKARESSVGRDR
SERCDESEISHKHTAATAKSHNTNGHNYRRAAEELRKQVSKVNGLTRASSVGTHKASGKK
QKDFRLPSKTVKYTATVSKGHVTYTKAKRELVKKAKLNHSKHGASAGLRAYSNNHHHNSH
HATSNGHGRPQLSHSGKAQSINAKTRKQVLLSNGVHKMTNGSRLNGRLNGRHSAREEEVV
DRPVRQGLRNSKRRSDAMTLLGAVTESEETKTKQQTTEVKKAKVQPSPLETRSKKALNQF
KSPNIVTIAHSITEMAASPIQKTGPAPPPSPPAAPASPSMPQNPAIPEPARQRPKRASAG
KLMFIRKAQQRAQTNPTLNRTTSTTSASKSFKPAEPTHTPPPRLDRDRERERERERSRAR
YAALGDVPIFKPSSREFQDPLVYLDSFREQVESCGLCRVLPPTDWRPECKLNDEMRFVTQ
VQRIHKLGRRWGPNVQKLACIKKHLKSQGISMDQPPVIGKSFKSSAFRSAFVCIGGCEVD
LARFSELVCDLGGMQQVMDLKKWSRLADLLRIPKSAQDRLAKLQEAYLQFLLSYDLLSPE
ELQRLEQEVRAEKEALERKRGPLEGHSDNGHHSLALPRYEPKNGLNGLSHRNGFRNHHKE
PDIQRQAGRRRLFAQEKKGEKVECEETEEEMEDEGVLSDQHKCIYKGRSVSLTTFYRIAR
NTMMMYFNKEPGAAEVEQDYWRIVEQRDCHVAVHYGKVDTNTHGSGFPVGKSEPFSKHGW
NLTVLPNNSGSILRHLGAVPGVTIPWLNIGMVFSTSCWSQDQNRLPYIDYLHTGADCIWY
SIPAEEKTKLDKVVHTLLQANGTPGLEMLEKNVMISPEVLCREGIKVHRTVQQSGQFVVV
FPGAFVSRVCCGYSVSETVHFATPQWMNLGYEAAKDLKCRRIAKPFSMEKLLYQIATAEA
KRENRLVLSTISSLLKDLRNIEMKQRQELYEAGLLSSARYCTHDHNQSPADTRKKPRKWL
ALESSERRCQMCQHLCYLSMVVQENENVVFCLECALHYVEKHKNCRGLKMMYRYDEEQIN
SLVNQVCGKALVRSGSEVCNGSSPIKPPAKRGPRKRESMKITLIPLPTHPSKSAAAAVS
NT seq 3960 nt   +upstreamnt  +downstreamnt
atgagcaaggaaagacctaagaggaatatcattcagaagaaatacgatgataatgatggg
atgccctggtcggaggagcgagtggtgcggaaggtgctttatctctcgctaaaggagttt
aagagcgcacagaagcgccagctctgtgacggcatcgacgatgagggaaaaggccctaat
gcttccttgtcaaatggacagctgaatggttctaagggaggacataaagaggacggatct
cgctctcagaggaaagatggaggaggcgagtactctgtggatggtccggctaaaaagagg
cccagactgcatgcacagaggaagtttgctcagtctcaacccaactctcccagcaacaca
ccagtgaagatggctgacccctctctgcccacaccgctcacacacatcacattcctctcc
agacgcaaacccaagacagaagacttcctcaccttcatatgcctacgaggctcaccggca
ttacccagtaacatggcctacttcggctgctctcaggatgaggaggatctggaagacgaa
gatgagattgaagaagagaaagcacccagcgtggcatctacatcgtgccagtctacacct
aagaagggcaaaccacatggcaagatcaacggactcgtgttgaatggccataaggtacac
aaggacaaagagctcactcccagatccaaagccagagagtcgtctgtggggagagatcgc
agcgagaggtgtgatgagtctgagatctcccacaaacacacggcagccacagccaagagc
cacaacaccaatggccacaactacaggagagctgcagaggagctccgaaagcaggtctcg
aaagtaaatggactcacaagggcatcatcagttggcacgcataaagccagtggcaaaaag
cagaaagactttcgtctgccgtccaaaactgtgaagtacacagccaccgtgtccaagggc
cacgtcacctacaccaaagcaaaacgagaactggttaagaaagccaaactcaaccacagc
aagcacggagcttctgcaggccttcgtgcttacagcaacaaccatcaccataattctcat
catgcaaccagcaatggccatggccggccccagctctctcactcaggaaaagcccaaagt
atcaatgcaaaaacccgcaaacaggtgctattgtcgaatggggtgcataagatgactaat
gggagccggcttaacggcaggctaaatggacgccatagtgccagggaagaagaggttgtt
gaccgaccagtgcggcaaggactgcggaactctaaacgcagaagtgatgccatgacattg
cttggagctgtaactgagagtgaagagactaaaactaagcagcaaaccactgaggttaag
aaagctaaagtgcagcctagcccacttgaaactcgcagcaagaaagccctgaatcagttc
aagtcccctaacatagtcactattgcacatagtatcactgaaatggctgcctcccctatt
cagaaaacgggtcctgctcctcctccatctccccctgctgctccagcttccccgtccatg
ccccagaaccctgcaatccctgagccagcacgacagcgacccaaacgtgcctctgctggc
aaactgatgttcatcagaaaagcacagcagagggcccaaactaatcctaccctcaaccgg
accacatccactacctcagccagcaagtccttcaaaccagcagagcccacacacacacct
ccacctcggctggacagagacagggagcgtgagagggaaagggagagaagcagggcaagg
tatgcagccttgggggatgtgcccatttttaagcccagctccagggagttccaggaccct
ttggtgtacctagactcatttcgggaacaggtcgagtcatgtggactgtgcagagtgctg
cctcctactgactggaggccagagtgcaaactcaatgatgagatgcgttttgtgacacag
gttcagcgcatacacaagctgggcaggcgttgggggcccaatgttcaaaaacttgcctgc
attaagaagcacctcaaatctcagggcatctcaatggatcagccacctgttataggcaag
tcctttaaatcctctgcatttagatctgcttttgtttgtataggtggctgtgaagtagat
ttggctcgtttttctgagctggtctgtgacttgggtggaatgcagcaggtgatggacctg
aaaaaatggagccggctggccgatctgcttcgcattcccaaatcagcacaggatcgtctg
gccaagctccaggaggcctacctccagtttctgctctcttatgacctgctttcacctgag
gagctccagcgtttggagcaggaggttcgagcggaaaaggaggctctggaacgcaagcgg
ggacccctggagggtcactctgataacggccatcattctctggctcttcctcgttatgaa
cccaagaatgggctcaatggcctcagccatcgcaatggcttccgcaatcaccacaaagag
ccagacatacagcggcaggctggccgccgcagactgtttgctcaggaaaagaaaggggaa
aaagtggagtgtgaagagacagaggaggagatggaagatgaaggtgttctcagtgaccag
cacaaatgtatatacaaggggagatcggtatctttgaccaccttttacagaatagcaaga
aatacaatgatgatgtacttcaacaaagagcctggggctgctgaagttgagcaagattac
tggcggatagtggagcagagggactgccatgtagcagtgcattatgggaaagtggacaca
aacacacatggaagcggcttccctgtgggcaagtcggagccattctccaagcatggatgg
aacctcaccgtccttcccaataactctggatccattctgcgccatcttggtgctgtgccg
ggggtgactattccctggctgaacatcggcatggtcttttctacctcatgctggtcacaa
gaccaaaaccgccttccatacattgattacttacacactggtgctgattgcatttggtat
tctattcctgctgaggaaaagacaaagcttgataaagtggtgcacacactgctacaggcc
aatggaacgccgggactggaaatgctggagaagaatgttatgatttctccagaggtgctt
tgtcgtgagggaataaaggtccatcgtacagttcagcagagtgggcagtttgtggtggtc
ttccccggtgcatttgtgtccagggtgtgctgtggctacagtgtgtctgaaactgtgcac
tttgccacaccacagtggatgaacctgggctacgaggctgctaaggacctgaaatgcagg
cgcatagcaaaacccttctctatggagaagctgctgtatcagatcgccacagctgaggcc
aaacgagaaaacagacttgtgctcagtacaatctcttctcttctcaaagatctcaggaac
atagagatgaagcaaaggcaggagctgtatgaagcagggctgctctcctccgcacgctac
tgcactcatgaccacaaccaatcacctgctgacaccaggaagaagccgcgcaagtggctg
gcactggagtcatcagagaggcgctgccaaatgtgccagcacctctgctacttatctatg
gtggtgcaggagaacgagaatgtggtgttctgtctggagtgtgcgctgcactatgtggag
aaacacaaaaactgccgcggactcaagatgatgtaccgctatgatgaggaacagatcaac
agtttggtgaatcaggtgtgtggtaaagcactggtgagaagcgggtcagaagtttgtaat
ggctccagtcccattaaaccaccggccaaacgcggccctcgcaagagggaatccatgaag
attactctcatccctctgccaacccacccatccaaaagtgccgctgctgccgtctcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (54)   
   KEGG ORTHOLOGY (1)   
   RefGene (48)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (68)   

Download RDF
DBGET integrated database retrieval system