KEGG   Danio rerio (zebrafish): 558976
Entry
558976            CDS       T01004                                 
Symbol
ranbp9
Name
(RefSeq) ran-binding protein 9
  KO
K23334  Ran-binding protein 9/10
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dre04121]
    558976 (ranbp9)
Ubiquitin system [BR:dre04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   CTLH complex
    558976 (ranbp9)
SSDB
Motif
Pfam: SPRY CTLH LisH
Other DBs
NCBI-GeneID: 558976
NCBI-ProteinID: NP_001074040
ZFIN: ZDB-GENE-021030-5
Ensembl: ENSDARG00000061048
UniProt: A1L252
Position
2:31806660..31826911
AA seq 597 aa
MSGPSSGCGFLMSVVVHGDLALNEQEKELNQRLRRLYPAVNEQETPLPRSWSPKDKFSYI
GLSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGVYYFEVKIISKGRDGYMGIGLSAQG
VNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNG
HSLGIAFTDLPPNLYPTVGLQTPGEVVDANFGQHPFVFDIEDYMREWRTKIQSQIDRFPI
GEREGEWQAMIQKMVASYLVHHSYCATAEAFAKSTDQAVHEELASIKNRQKIQKLVLSGR
MGEAIETTQQLYPSLLERNPDLLFMLKVRQFIEMVNGTDSEVRCLGGRSPKSQDSYPGSP
RLFNSPVHKPSSSQAYQTGFDSNYCNGVSSSKGHTSAHSHKSCPPTLSSPELGVLNGSRG
QQTIVSSEVEMEVDHFSNGVSESSSNGFLNGSSTHGTEQEDCDADMEVDSTQSKRQLCGG
SQAAIERMIQFGRELQSMSEHLRRERGKNSANKKMLKDAFSLLAYSDPWNSPVGYQLDSI
QREPVCSTLNSAILETHNLPKQPPLALAMGQAAQCLSLMARTGSGSCAFASVDDYLH
NT seq 1794 nt   +upstreamnt  +downstreamnt
atgtcaggaccgtcatcgggctgtgggtttctgatgtcggttgttgttcacggagacttg
gctctcaacgagcaggaaaaagagctcaaccagcggcttagacgcctttacccagccgtc
aacgaacaggagaccccactgcccagatcctggagccccaaagacaaattcagctacatc
ggcctgtctcaaaacaacctccgggtgcattataaaggtcatggaaagacccctaaagat
gctgcatctgtccgtgcaacacacccgattccagctgcatgtggggtctattactttgag
gtgaaaattatcagtaaaggacgagatgggtacatggggattggcctgtcagctcaaggt
gtcaacatgaacagacttccaggttgggacaaacactcatatggctaccatggggacgat
ggccactctttctgctcttctggcactggacagccctatggacctacatttacaacaggc
gatgtgattggctgctgtgtgaacctcatcaacaatacctgtttttacacaaaaaatggc
cacagtctaggcatagcttttacagatttaccgccaaacctgtatcccacagtgggtcta
cagaccccgggggaggtcgtggacgccaactttgggcagcatccatttgtctttgatatt
gaggattacatgcgggaatggagaaccaagattcagtctcagattgaccgcttccccatt
ggggagagagaaggagaatggcaagccatgattcaaaaaatggtggcctcctatctggtt
caccacagttactgtgccaccgctgaggcctttgccaaatcaactgaccaggctgtacat
gaggaacttgcatctatcaaaaatagacagaaaatccagaagctggtcctgtctggcaga
atgggagaggctatagagaccactcaacagctttatcccagcctgttagagagaaaccca
gacctcctcttcatgttgaaagtcaggcagttcattgagatggtgaatggcactgacagt
gaggtcaggtgtcttggtggcaggagccctaagtcacaggacagctacccaggctcccct
cgcctcttcaacagccctgttcacaaacccagcagctcccaggcttaccagacaggtttt
gatagtaattattgtaatggagtttcatcaagtaaaggccacacctcggctcacagtcac
aagtcatgtcctcctaccctttcaagtcctgagcttggtgtcctgaatggtagtaggggt
cagcagacgattgtgagtagcgaagtggagatggaggtggatcacttctcaaacggagtg
tctgaatcctcttcaaatgggtttctgaatggcagctctacacacgggacagagcaagag
gactgtgatgcagatatggaagtggatagcactcagtctaagagacagttgtgcgggggg
agccaggcagccattgagaggatgatccagtttggtcgggagctacaaagcatgagtgag
cacttgcgccgtgagcggggcaaaaattcagcgaataagaagatgctcaaggatgcattc
agtttgctggcatattcagatccatggaacagtcccgtgggctaccagctagactccatt
cagagagagcctgtctgttccacactcaacagtgcaatattagagactcataacctgcca
aagcagcctcccttggctctggccatgggtcaggcagctcagtgtctgtccctcatggct
cgcaccggcagcggatcctgcgccttcgcatcagtggatgattacctgcactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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