KEGG   Danio rerio (zebrafish): 559074
Entry
559074            CDS       T01004                                 
Symbol
lingo4b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b precursor
  KO
K23533  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    559074 (lingo4b)
Membrane trafficking [BR:dre04131]
 Endocytosis
  Lipid raft mediated endocytosis
   RhoA-dependent endocytosis
    559074 (lingo4b)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_5 I-set LRR_1 Ig_3 ig LRRNT V-set Ig_2 LRR_9 C2-set_2 LRR_6 Ig_C17orf99
Other DBs
NCBI-GeneID: 559074
NCBI-ProteinID: NP_001082850
ZFIN: ZDB-GENE-091214-3
Ensembl: ENSDARG00000078527
UniProt: A3KH16
Position
16:complement(29455938..29480796)
AA seq 604 aa
MFLDLCGQRGAWTVLLLWCLNLSAADLPCPQRCSCSRDPLEVNCSSRHLTAVPEGLPTNA
KRLDLSGNQLKTLARRQFSSLSKLEDLDLSENIISMIEVETFQGLKNLRYLRIKNNRLKI
LPVGVFSGLSNLRRLDISENEILVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQAL
KELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQILHWSSLE
MLNSNSLVGLNLTTLVLTNCNLSAIPYSPLRHLAYLQYLDLSYNPITSIQGNLLGDLLRL
QELHLVGGNLLRIEPGAFRGLSRFRLLNVSSNRLSTLEESAFHSVGNLQTLRLDRNPLAC
DCRLLWVMRRRRRLDFDGRQPTCSPLNHQRKAFRDFSEAELPVVFTCRQAQILNRQLQDI
SVIEGMRVHFDCKADGYPSPSITWLSAQQSALSSAGRVRVLTNGSLQISYAQVQDSGTYL
CSAANAAGNDSISVSLHVEGLPQNRTVSYFSDEGWIETSAPPSTNSSARVSSPYPFDAKT
LIIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDFVPRSSMGGGGDGGDTGRFT
MKLI
NT seq 1815 nt   +upstreamnt  +downstreamnt
atgttcctggatttgtgtggtcagcggggcgcatggaccgtcctgctgctgtggtgcctg
aacttgtcagctgcagacctcccctgccctcagaggtgcagctgctcccgagaccctctg
gaggtcaactgctcttcgagacacctgactgctgtgcctgagggtttacccaccaatgcc
aaacgcttggatctttcaggaaaccagctgaaaacgctggctaggcgtcagttctccagc
ctgtcaaagctggaggacctggacttgagtgagaacataatctccatgattgaggtggaa
acatttcagggtctgaagaacctgcgatacttgaggattaagaacaaccgtctcaagatc
ctgccagtcggggttttctccggcctctccaaccttcgacgtctggatatcagtgagaat
gagatcctggttttcctggattacacattcagggatatgattaacttgcagcagctggac
gcaggggaaaatgacctggtgtttatctcgcagcgtgcgtttgttgggcttcaggcactg
aaggagctgaacgtggaccgcagcaatctgacctccatcccaaccgaagctctgtcgcaa
cttcagagcttgactaagctgcgtctgcgcaagctcactattagcgtgctgcccaacaat
gcctttcgccgactgcaccagctgcgtactttgcagatcctccactggagttctctcgag
atgctgaacagcaacagcttggtcggcctgaacctgaccactttagttttaaccaactgc
aatcttagtgccataccttactctcccctgcgccatcttgcctacctgcagtaccttgat
ctatcctacaaccccatcacctccatacagggcaaccttttgggggatcttctgagactc
caagagttgcacctggtgggtggaaacctgctacggatagagccaggtgcctttaggggt
ctgtcccgctttcgcttactcaatgtgtcctcaaatcgtctgtccacactggaagaaagc
gcctttcactctgtggggaacctgcagacactgcggctggacagaaacccgttggcttgt
gactgtaggctactctgggtgatgcgacggcgtcggcggctggattttgatggccggcaa
cccacttgttcacccctgaatcatcagaggaaggcatttcgggacttctcagaggcagag
cttccggttgtttttacgtgcagacaggcgcagatcctgaaccgacagctgcaggatata
agcgtgattgagggaatgagagtacattttgactgcaaagcagatggctatccatcaccg
tctataacctggctgtcagcccaacagtctgcacttagctctgccgggagagtacgagtg
cttactaatgggagtttacagatcagttatgcgcaagtacaagacagtggaacatattta
tgtagcgcagctaatgctgcaggtaatgacagcatctctgtgagtctgcatgtggagggg
cttccacaaaaccgcacagtgtcatatttctcagacgagggatggatagaaacttcagca
cctccatctaccaactcctcagctcgggtgtcaagtccttacccgtttgatgctaaaacc
ctcatcattgctaccaccatgggatttctgtcttttctcagctctgttgcaatctgtttt
gtgtttatgttcttctggagtcagagcaaaggtcagataaaacacactgccacaatagac
tttgtgccacgatcatctatgggtggaggtggagatggtggagacaccggaagattcaca
atgaagcttatttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (14)   
   Pfam (14)   
All databases (50)   

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