KEGG   Danio rerio (zebrafish): 559454
Entry
559454            CDS       T01004                                 
Symbol
gpc5a
Name
(RefSeq) glypican-5a precursor
  KO
K08111  glypican 5
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:dre00535]
    559454 (gpc5a)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:dre00537]
    559454 (gpc5a)
Proteoglycans [BR:dre00535]
 Cell surface proteoglycans
  Glypican family (GPI-anchored HSPG)
   559454 (gpc5a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:dre00537]
 Others
  559454 (gpc5a)
SSDB
Motif
Pfam: Glypican PhaP_Bmeg VopS_N GCHY-1
Other DBs
NCBI-GeneID: 559454
NCBI-ProteinID: NP_001289165
ZFIN: ZDB-GENE-140106-260
Ensembl: ENSDARG00000103647
UniProt: V5NES1
Position
1:complement(3100244..3295045)
AA seq 544 aa
MEMAIRGILFYTFFAVFTDVCQGNLMDCEEVRKVFQLKQIGPAKSIPDTPRTGSDLQVCL
SRNLTCCTKKMEERYQVAARRDIQNLLQISSSSLKFLFSRNVAAFQESVESLVRQAENHT
LSILHQSHRDLSSPAASAPVGEFFTEVALFILGSELSLEESSQSFFNALFPLIYERLIDS
RLSPPYAECLRSSAQDLAPFGAAPIRLASQIAHASLPARVFLQALHLGIEIINTTDHIQL
SRECRRGLLRMSYCPHCQALTSSKPCMGYCLNVVRGCLANLAEVDAHWREFVRSLETLAG
RMHGELDLEQVLLGAHELVRDAVAHAQRSTARIHAQVQRVCGQSSRWTEPVNSVQHSTGR
ASDSIPLRGANRNTEDSLSSRRTEFLHSLRLYRTFYGALADQLCISELASADGRACWNGD
DIARSYTLRVVGNGIKAQAENPEVKVKEADPVINQVIDKLKHINQLLQGRSIPKLGSLDQ
IETGSGDGNSGDCDDEDGCWGSGNGAVQRRGTVTKLFGSESRRSLWKNKRRQRGVSAGSR
IDLQ
NT seq 1635 nt   +upstreamnt  +downstreamnt
atggaaatggcgatccgtggaattttgttttatacattttttgcggttttcacagatgtc
tgtcaggggaatttaatggactgcgaagaagtgcgtaaagtttttcagttgaaacaaata
ggtcctgcaaaatcaatacctgacacgccgagaacaggttcagacctgcaggtttgctta
tccaggaatctaacatgctgcaccaaaaagatggaggagcgttaccaggtggcggcccgg
cgggatattcagaaccttctccagatctctagctccagcctaaagttcctcttctcacga
aatgtggccgctttccaagaaagcgtggagtctctggtgcgtcaggcggagaaccacacc
ctctccatcctccatcagtcccaccgtgatctctccagcccagcagcatcagcaccagtc
ggggagtttttcacagaagtggctctgttcatcctgggctctgagctcagtctagaagag
tcctctcagagcttcttcaacgctcttttccccttaatatacgagcgtctgattgactcc
cgtctgtctcctccatacgccgaatgcctgcgctcgtccgctcaagatctagcaccgttc
ggagcagccccaatccgcctggcgtcccaaatcgcccatgcttctctacctgctcgcgtg
tttctccaagcgctccatttgggcatcgagatcataaatacgaccgatcacatccagctg
agccgcgagtgcagacgtggcctgctgaggatgagctactgcccgcactgccaggctctg
acctcaagcaaaccctgcatgggatactgcctgaacgtggtgcgcgggtgtctggctaac
ctggctgaagtggatgcccactggagggagtttgtacgctcgctggagacgctggcagga
cggatgcacggagagctggatctggagcaggtgctgctgggggcgcatgagctggtgagg
gacgctgtggcgcacgctcagaggagcacagcgaggatacatgcgcaggtgcaacgtgtg
tgtggtcagtccagcagatggacggagccggtgaacagcgtccagcacagcacaggacga
gcatcagactcgataccactgagaggagcaaacagaaacacagaggactcgctcagcagc
cgcagaactgagttcctccacagtctgcgtttatatcgcactttttacggcgctctggct
gatcagctgtgcatcagtgaactggcctctgcagacggacgggcctgctggaacggagac
gacatcgccagaagctatactctgcgagtggttggcaatgggattaaagcgcaggctgaa
aacccagaagtcaaagtgaaggaggccgatccggtgatcaatcaagtcattgataaactc
aagcacatcaatcagctgctgcagggcaggtcgatcccaaaactgggctctctggaccag
atcgagacgggcagcggagacggaaacagcggagactgtgatgatgaggacggatgctgg
ggatcagggaacggagcagtccagaggagagggacagtcactaaattgtttggcagcgaa
tccagacgctcgctatggaaaaacaaaaggcgtcagcgaggcgtatcggcagggagtcgc
attgatctccagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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