KEGG   Danio rerio (zebrafish): 559742
Entry
559742            CDS       T01004                                 
Symbol
hmgxb4a
Name
(RefSeq) HMG domain-containing protein 4a
  KO
K11298  HMG domain-containing protein 4
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dre03036]
    559742 (hmgxb4a)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    559742 (hmgxb4a)
SSDB
Motif
Pfam: DUF4171 HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 559742
NCBI-ProteinID: NP_001120984
ZFIN: ZDB-GENE-070912-675
Ensembl: ENSDARG00000075783
UniProt: B0UXS3
Position
3:26044834..26060601
AA seq 624 aa
MAFEEIRKKGMMDVPGAEGEVSLVAGRSQREKKRSYKDLLREEEEIAAQVCKTSKKHHKD
SELFLLGGDSHKKKKKHSSDDYYHRDHHSSGQPPHKKKRKSSDRSPSLTSSSSSHPSHTT
DTAMGLLEAITSPLATGSEPPPHLHKKPSYPQHASSHSSKERKRDGSSKNSSHSYPHSRP
PGSSSSKKHSSSSSKSLLFHGGAAKGEPLTLCEAEGLKMKLILSSKEKSEGAGVNDFPGQ
SSSSSSGVAGHHSSSGSKKGGIKKEKDKEKDKMMSKPPKKKQHIREPLPVVGKEVEVEGM
GGESSSSGGELEAGELVIDDSYTRLSKKKKKSKKSKKKKDKERDRDREKGSREKKHSKGG
SGGKKSSQGDQPRSHSHTHSSSNHSSSGGMYPMAPPTSSHQHQSIELIGEKKKKKEEKER
DKHDKDKPKKKNMTAYQVFCKEYRVNINAEQPGLVFGELSKKLAEVWKQLPEKDKLVWRQ
KAQYLQHKQNKAEAMTVKRKTLTTSDSKSKGSSKAFSLGSGLAPQGRSSLGMSLSPARVP
DVDPIDAAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSILCALGPLTCLTAQVP
QLNGCPRNILSNTLDNIAYIMPGL
NT seq 1875 nt   +upstreamnt  +downstreamnt
atggcctttgaggagatcagaaagaaaggaatgatggatgttccaggtgctgaaggagag
gtcagtcttgttgcaggtcgcagccaaagagagaagaagcgttcttataaagatctgttg
agagaggaagaagaaatcgcagcacaggtgtgcaaaacctccaagaaacaccacaaggat
tctgagcttttcctgctaggaggagattctcacaagaaaaagaagaagcattcgagtgat
gattactatcacagagaccaccacagctctggtcagcctcctcacaagaagaagcgcaag
tcttcagaccgctcgccctctctgacctcgtcgtcctcctctcacccgtcccacaccaca
gacactgccatgggtctcctggaggccatcacgtccccgctggccacaggctccgagccg
ccccctcacctccacaaaaaaccctcctaccctcaacacgcctcctcacactcctccaaa
gagcgcaagcgtgatggcagctccaaaaacagcagccactcatacccgcattcacgtccg
cccggctcgtcctcatctaaaaaacactcctcctcctcttcgaagtctctgctgtttcat
ggaggagctgcgaaaggagagccgctgacgctctgtgaagctgaaggcctgaagatgaag
ctcatcctttcttcaaaagagaagagtgaaggtgcaggggtgaatgactttcctggacag
tcttcttcctcttcttcaggtgttgcaggccatcattcgtcctccggctcaaagaaagga
gggattaagaaggagaaagacaaggagaaggacaagatgatgtcaaagccaccaaagaaa
aagcagcacatccgagagccgctgcctgtcgtggggaaagaggtggaggtcgagggcatg
ggaggagagagctcatcttcaggaggagaactagaggctggagagttagtgattgacgac
tcctacacacgtctctccaaaaagaagaaaaagagcaagaaaagcaaaaagaaaaaagat
aaagagcgagaccgagatcgagagaaaggatcccgcgagaagaaacacagcaaaggagga
agtggagggaagaaaagcagtcaaggggatcagcctagaagccactcccacactcacagc
tcatccaatcacagctcttccggtggcatgtaccctatggctccgcccacctcatcgcat
caacatcaaagcattgaactaataggcgagaagaaaaagaaaaaggaggaaaaagagcga
gacaaacatgacaaggacaagccgaagaagaagaacatgacggcctatcaggtgttctgt
aaagagtacagggtcaatatcaacgcagagcagcctggattagttttcggggagctgagt
aagaaactcgcagaggtgtggaaacagctgccggaaaaagataaactggtatggagacag
aaagctcaatatctccagcacaagcagaataaagctgaagctatgaccgtcaagcggaaa
accttaacaacctcagacagtaaaagtaaaggctccagtaaagcgtttagtttagggtca
ggtttggcccctcagggccgctcgtctctgggcatgtctttgtctccagctcgagtccct
gatgtggatccgatagatgcagcagctcacctgcagctgctgggagagtcgctgtctctg
attggacaccgacttcaggagacagagggaatggtggcggtgtcgggcagtctttcggtt
ctgttagactctattctatgtgctcttggtccattaacctgcttaacagcacaagttccg
cagctcaacggctgtccacgaaacattctgtcaaatactctggacaacatcgcttacata
atgcctggactatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (40)   

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