KEGG   Danio rerio (zebrafish): 560033
Entry
560033            CDS       T01004                                 
Symbol
capns1b
Name
(RefSeq) calpain small subunit 1b
  KO
K08583  calpain, small subunit 1
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:dre01002]
    560033 (capns1b)
Peptidases and inhibitors [BR:dre01002]
 Cysteine peptidases
  Family C2: calpain family
   560033 (capns1b)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_6 EF-hand_1 EF-hand_8 EF-hand_4
Other DBs
NCBI-GeneID: 560033
NCBI-ProteinID: NP_001103176
ZFIN: ZDB-GENE-030131-5206
Ensembl: ENSDARG00000013804
UniProt: A7MBX1
Position
15:29116114..29122830
AA seq 213 aa
MFMTKIIKGLVDVVSNIDQFVPSDPPPPKRPLAYASHNETDEERQFRKVFQQLAGDDMEV
SPKELMTILNKIISKHGDLKTDGFSIESCRSMVAVMDSDSTGKLGFEEFNYLWNNIKRWQ
AIYKTYDADHSGVIGSDELPGAFKAAGFPLNDQLFQLIVRRYSDEKGNMDFDNYIGCLVR
LDAMCRAFKTLDKDNNGTIKVDIQEWLQLTMYS
NT seq 642 nt   +upstreamnt  +downstreamnt
atgtttatgaccaaaataattaaagggctcgtagatgttgtcagcaacatcgaccagttc
gttccttctgaccctcctcctcccaaaagaccacttgcatatgcaagccataatgaaact
gatgaggagagacagtttcgcaaagtgtttcagcagcttgcaggggatgacatggaggtg
agccctaaggaactgatgaccatcctcaacaagattatttcaaaacatggtgatctgaag
acagatggtttctccattgagtcctgcagaagcatggtggctgtcatggatagtgacagt
actggaaaactgggttttgaagaatttaattatctttggaataacatcaagaggtggcag
gccatttacaagacatatgatgccgatcactctggtgtgattgggtctgatgagctgcct
ggagcttttaaagcagcaggctttccactcaatgaccagctattccagctgatcgttcgt
cgatatagtgatgaaaaaggaaacatggactttgacaattacattggatgtctcgtgcgc
ctggatgctatgtgtcgtgccttcaagacacttgataaggacaacaatggcaccattaaa
gttgacattcaagagtggttgcagctgactatgtactcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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