KEGG   Danio rerio (zebrafish): 560088
Entry
560088            CDS       T01004                                 
Symbol
si:ch211-202f3.4
Name
(RefSeq) calpain-1 catalytic subunit-like isoform X1
Organism
dre  Danio rerio (zebrafish)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III
Other DBs
NCBI-GeneID: 560088
NCBI-ProteinID: XP_009291546
ZFIN: ZDB-GENE-131120-116
Ensembl: ENSDARG00000091723
UniProt: E7F0H3
Position
17:45602373..45620966
AA seq 523 aa
MPPPNNCHHNPNEDEVDSLTSPLYFLDQNYQELQQKCLTESTLYSDELFPPDNSSIGLFD
EVPPEVDMSQIVWKRPSELVSDPNLIVDDVSRFDYAQGSVLGNCWFLASIGALTFEKDIM
KQVLPAEQSFTKDYAGIFHFRFWRFEKWIDVVIDDQLPTIDDELLFVCSKTSNEFWPALL
EKAYAKVCGSYADLNAGFISEALMDFTGGTHMYYTLSSAPADLWKIMECAFISKTLIGCG
SNSEGSPEENELLHGIIADHAYTVTGVFEVISEENPVQLVRLLNPWGEEEWQGDWSDESP
LWETVCEEARKCCREVLNDGEFWMSMEDFTRLFESIDICCLCPDFLDGSSDCHWTSKRHF
GRWNAEKFMYNTFIHHLTAGGDIIKTETFWKNPQFRVTIDELNEDCASGQRPENILVSLM
QNHEKRNRNSQENYDIGFYVFEIPLEMRHQNERFAMEFFADREPVAHTDDLVWLREVMKF
FRLEPGEYLIVPCTKNPGETASFVLSVFSKHETHLEQIQETTE
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgcctcctccaaacaattgccaccacaacccaaatgaagatgaagtggattccctcacc
agtcctttgtacttcttggatcagaactaccaggagcttcagcagaagtgtctaactgaa
agcacactgtacagcgatgagctgttccctccagacaacagctctattggcctgtttgat
gaagtgcctccagaggtggacatgtcccagattgtgtggaagcggccatctgagttggtg
tcggaccctaacttaattgtggatgatgtgtccaggtttgactatgcacaggggagtgta
ttaggaaattgttggttcttggcttcgatcggggctctaacttttgagaaggacatcatg
aaacaagtcctgccagctgaacagtcattcaccaaggattatgctgggatttttcatttc
aggttctggcggtttgaaaaatggattgatgttgttattgatgaccagcttccaactatt
gatgacgaactgctttttgtgtgttcaaaaacgtcgaatgagttttggcctgccttactg
gagaaagcttatgccaaggtgtgtgggtcctatgctgacttgaacgctggcttcatttct
gaggccctaatggacttcactggtgggacgcatatgtattacacactgagttcagctcct
gctgacttgtggaaaatcatggaatgtgcatttatatcaaagacgcttattggttgcggt
tccaattcagagggttcacctgaagaaaatgagttactgcatggcataattgcagaccat
gcttacactgtgaccggggtatttgaggtaataagtgaggaaaacccagttcagctggtg
agactgttaaatccatggggtgaagaagagtggcaaggagactggagtgatgagtcacct
ttgtgggagacggtttgtgaggaggcccgcaaatgttgccgtgaagttttaaatgatggg
gagttctggatgtcgatggaagacttcaccagactttttgaaagcatagatatctgctgt
ctctgtcctgattttctggatggttcctctgattgccactggacctccaaacgccatttt
ggcagatggaatgcagagaaattcatgtataatactttcatacaccaccttacagctggt
ggtgacatcattaagacagagaccttctggaagaatcctcagtttcgggtgacaattgac
gagctgaatgaggattgtgctagtgggcagcgccctgaaaatatactggtgtccctgatg
cagaaccatgagaagagaaacagaaatagccaagaaaattatgacattggcttttatgtc
tttgagataccattagagatgagacatcagaatgagaggtttgcgatggagtttttcgct
gaccgagagcctgtggcacacactgatgatttagtttggttgagagaggtgatgaaattc
ttcagactggagccaggggagtacctgatcgtgccctgcacaaagaatcctggcgagact
gcctccttcgtcctgtctgtcttctcaaagcatgaaacacacttagagcaaattcaagag
actactgagtag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

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