KEGG   Danio rerio (zebrafish): 560828
Entry
560828            CDS       T01004                                 
Symbol
rpl13a
Name
(RefSeq) 60S ribosomal protein L13a
  KO
K02872  large subunit ribosomal protein L13Ae
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03010  Ribosome
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    560828 (rpl13a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:dre03011]
    560828 (rpl13a)
Ribosome [BR:dre03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    560828 (rpl13a)
SSDB
Motif
Pfam: Ribosomal_L13 SLT_L DUF3489
Other DBs
NCBI-GeneID: 560828
NCBI-ProteinID: NP_997949
ZFIN: ZDB-GENE-030131-168
Ensembl: ENSDARG00000044093
UniProt: Q7ZUR9
Position
17:24615091..24617919
AA seq 205 aa
MADRFNKVLIIDGRGHLLGRLSAIVAKQVLLGHKIVVVRCEGINISGNFYRNKLKYLAFL
RKRMNTNPSRGSYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKRKRM
VVPAALKIVRLKPTRKFALLGRLAHEVGWKYQAITATLEEKRKEKAKLRYSKKKVEMKLT
KQAEKNVESKIAVYTDVLKKYGVLV
NT seq 618 nt   +upstreamnt  +downstreamnt
atggcggaccgattcaataaggttctgatcattgatggccgaggccatctcctcggtcgt
ctttccgctattgtggccaagcaagtgctgttgggccacaaaattgtggtggtgaggtgt
gagggtatcaacatctctggaaacttttaccgtaacaaattgaagtatttggctttcctc
cgcaagagaatgaacaccaacccttcccgtggatcatatcacttcagagcccccagcaga
atcttctggaggactgtaagaggtatgcttccacacaaaaccaagaggggtcaggctgct
ctggacaggctgaaggtgtttgatggcatccctccaccttatgacaagagaaagcgcatg
gttgtcccagctgctctcaagattgtgcgtctgaaacccacacgcaaatttgccctgctt
ggacgattggcccatgaagttggctggaagtaccaggccatcaccgccacactggaggag
aagagaaaggaaaaggccaagctgcgctattccaagaagaaagttgagatgaagctgact
aagcaggctgaaaagaacgttgagagcaagatcgcagtatatactgacgttcttaagaaa
tatggtgttcttgtttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (35)   

Download RDF
DBGET integrated database retrieval system