KEGG   Danio rerio (zebrafish): 561025
Entry
561025            CDS       T01004                                 
Symbol
hmgb3a
Name
(RefSeq) high mobility group protein B3a
  KO
K11296  high mobility group protein B3
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dre03036]
    561025 (hmgb3a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    561025 (hmgb3a)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    561025 (hmgb3a)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   561025 (hmgb3a)
SSDB
Motif
Pfam: HMG_box_2 HMG_box NOA36
Other DBs
NCBI-GeneID: 561025
NCBI-ProteinID: NP_001116308
ZFIN: ZDB-GENE-050428-1
Ensembl: ENSDARG00000056725
UniProt: F1QGP8
Position
7:25913225..25918281
AA seq 213 aa
MAKGDPRKPKGKMSAYAYFVQTCREEHKKKSPEIPVSFSEFSKRCSGRWKAMTDKEKSRF
EDMAKQDKVRYDQEMMHYMPGKRGKKKDPNAPKRPPSGFFLFCSEHRPQIKAQYPSLGIG
DVAKKLGEMWNGLTDANKQPFLMKANKLKDKYQKDVADYKTKSKAGGVSMGMGMPMANCM
PPKPMMKSNMDDEEDDEEDEEEEEDDDEYDDDE
NT seq 642 nt   +upstreamnt  +downstreamnt
atggcgaaaggggaccccaggaagcccaagggcaagatgtctgcttatgcctatttcgtt
cagacttgccgagaggagcacaagaagaaaagtcctgagattccggtcagcttttcggag
ttctccaaaagatgctccggaaggtggaaggcgatgactgataaagagaaatcccggttt
gaagacatggccaaacaagataaggtgcgttatgatcaggagatgatgcattacatgcca
ggaaagagaggcaaaaagaaggatcccaatgcccccaagagaccaccctctggatttttc
ctgttctgctctgaacatcgtcctcaaatcaaggctcagtatcccagcctgggcatcgga
gatgtggccaaaaaactgggcgagatgtggaatggcctcacagatgctaacaaacaaccc
ttcttgatgaaagccaacaagctgaaggacaagtaccaaaaggatgttgcggactacaag
acgaagagcaaggccggaggtgtttccatgggcatggggatgccaatggctaactgtatg
cctcccaaacccatgatgaagagcaacatggacgatgaagaagatgacgaggaagacgaa
gaagaggaagaggatgatgacgaatatgacgacgacgaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (51)   

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