KEGG   Danio rerio (zebrafish): 561082
Entry
561082            CDS       T01004                                 
Symbol
cavin1b
Name
(RefSeq) caveolae-associated protein 1b
  KO
K19387  polymerase I and transcript release factor
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dre03021]
    561082 (cavin1b)
Transcription machinery [BR:dre03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    Transcription termination factors
     561082 (cavin1b)
SSDB
Motif
Pfam: PTRF_SDPR DUF1664 Nuf2_DHR10-like DUF948 Metallophos_2
Other DBs
NCBI-GeneID: 561082
NCBI-ProteinID: NP_001108021
ZFIN: ZDB-GENE-030131-5509
Ensembl: ENSDARG00000059362
UniProt: A6NA21
Position
24:7637261..7668320
AA seq 454 aa
MEVIEDSRLHLEVPELRKSLTEISEDEINLPVSDDEDEATAENKAKDAAEKEEAGEGGEM
NGVMVLTLLDKIIGAVDQIQQTQAGLEARQRDMERSVTGIQGELTKLSKSHTTTANTVNK
MLEKVRKVSVNVKSVRGNLEKQAGQIKRLESNENELLKRRNFKVMIYQDEVKVGSKVNVA
KSMKYPEPVEGEAEGELKAAAEEGGEDKEKVNLDLSSDEEEVEIEETIEESRAERIKRSS
LQRVQNIKTVFSKGNMEKTKQKTKENLEKTKQKTKENLEKTRMRTKENLEKTRQKTKENL
EKTKQKTRENLEKTRHNIEKKMGKLGTRMSVNPERKEKMKTSQKKVMKSFTPDHTIYARS
KTAVYKVPPFTFHVKKIREGEVEIQGTEMVEVVGDTEEVENAVMEGEEDAEMEMEAGEMV
EEDEDETEDSPEMRALLEKGDELVLVEDHDRDSD
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggaggtgattgaagacagccgtctgcatctggaggtgcccgagctgcgcaagtctctt
actgagatctcagaagatgaaatcaacctcccggtctctgatgatgaagacgaagccacc
gccgagaacaaagctaaagatgctgccgagaaagaagaggctggggagggtggcgagatg
aatggggtcatggtcctcacgctgcttgacaaaatcattggagccgttgaccagatccag
cagacgcaggctgggttggaagcccgtcagcgggacatggagagatctgtgacgggaatc
cagggggagctcaccaaactgtccaagagccacaccaccacagccaacaccgtcaataag
atgctggagaaggtgcgtaaggtgagcgtgaacgtcaagtcggtgcgggggaacctggag
aaacaggctggccagatcaaacgtctggagagcaacgagaacgagctcctaaagagaaga
aactttaaagtcatgatctatcaggatgaagtaaaagtgggttcgaaagtgaatgtggcc
aagtctatgaagtatccagagcctgtggaaggggaagctgagggtgaactcaaagctgca
gcagaagaaggaggagaggacaaagagaaagttaatctggacctgtcctctgatgaagag
gaggtggagattgaggagacaattgaggagtctcgagcagaacgcatcaagcggagcagc
ctgcaacgtgtccagaacatcaaaaccgttttctccaaggggaatatggagaaaaccaaa
cagaagaccaaggagaacttggagaagaccaaacagaagaccaaagagaacctggagaaa
actcgcatgaggaccaaagagaacttggaaaaaacaagacagaagactaaggaaaacctt
gaaaagaccaaacagaagacccgagagaacctggagaaaacacgtcacaacatagaaaag
aaaatgggtaaacttggcacccgcatgtccgtgaaccccgagcgcaaagagaagatgaag
acttcacagaagaaggtgatgaagtcttttactcctgaccacaccatctacgcccgctcc
aaaacggccgtctacaaggttccaccgttcaccttccatgtgaagaagatccgtgaggga
gaagtggagattcagggaactgagatggtggaagttgtcggcgacacagaggaggtggag
aacgcagtgatggagggagaggaagatgcagagatggagatggaagctggagagatggtg
gaggaagacgaggacgagacagaagacagccctgagatgagagcgctgctggagaaagga
gacgagctggtgctggtggaagatcatgacagagacagcgattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (38)   

Download RDF
DBGET integrated database retrieval system