KEGG   Danio rerio (zebrafish): 562183
Entry
562183            CDS       T01004                                 
Symbol
cadm1b
Name
(RefSeq) cell adhesion molecule 1b isoform 1 precursor
  KO
K06781  cell adhesion molecule 1
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    562183 (cadm1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:dre04515]
    562183 (cadm1b)
Cell adhesion molecules [BR:dre04515]
 Immunoglobulin superfamily
  Necl family
   562183 (cadm1b)
SSDB
Motif
Pfam: Ig_3 I-set Ig_2 ig C2-set_2 V-set C1-set Adhes-Ig_like FAS_meander Syndecan
Other DBs
NCBI-GeneID: 562183
NCBI-ProteinID: NP_001107024
ZFIN: ZDB-GENE-080327-34
Ensembl: ENSDARG00000042677
UniProt: B0F6R1
Position
15:18646160..18987365
AA seq 411 aa
MKSLKQVFNMAISGLGSHSISLFFYVILAAFLHKGAAQTTPVQGQNLVTNNVSVVEGETA
IISCRVKNNDDSVIQLLNPNRQTIYFRDVRPLKDSRFQLVNFSDNELLVSLSNVSLSDEG
RYVCQLYTDPPQEAYADITVLVPPGNPILESREEIVSEGNETEITCTAMGSKPASTIKWM
KGDQPLQGEATVEELYDRMFTVTSRLRLTVSKEDDGVAVICIIDHPAVKDFQAQKYLEVQ
YKPEVKIVVGFPEGLTREGENLELTCKAKGKPQPHQINWLKVDDDFPSHALVTGSDLFIE
NLNKSYNGTYRCVASNLVGEAYDDYILYVYDSRADGAPQKIDHAVIGGVVAVVVFAMLCL
LIVLGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGHNNSDDKKEYYI
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgaaaagtctgaagcaggtgttcaacatggcgatctcgggactcggatctcactctatt
tcactgtttttctacgtgattttagctgcgtttctgcataaaggagccgctcagaccaca
ccagtgcagggtcagaacctggtgacaaataatgtctcagtggtggagggcgagacggcc
atcatcagctgccgggtgaaaaacaacgacgactccgtcatccaactgctcaaccccaac
cggcagactatctacttcagagacgttagacctttgaaggacagtcggtttcagctggta
aacttctccgacaacgagctcttggtgtccctgtccaacgtgtctctgtcggacgagggc
cgctacgtgtgtcaactctacacggatccaccgcaagaagcctacgccgacatcactgta
ctggttccaccaggcaacccaatcttagagtcccgcgaggaaatcgtgagcgaggggaat
gagaccgagataacctgcaccgccatgggcagcaaacctgcttccaccatcaaatggatg
aaaggcgaccaaccactgcaaggtgaggcgactgtggaggagttatacgacaggatgttc
actgtcaccagccggctcaggctcaccgtctctaaggaggacgatggagtggccgtcatc
tgcatcattgaccatccagccgtgaaggacttccaggcccagaaatacctggaagtgcag
tataaaccagaagtgaagattgtggtgggattcccagagggtttgaccagagaaggagaa
aatctcgagctgacatgcaaagctaaaggaaaaccgcagcctcatcaaattaactggctc
aaagtggatgatgatttcccctcccacgccttggtaactggctctgatctcttcatcgaa
aaccttaacaagtcctacaacggaacgtaccgctgtgtggcatctaacttagtgggagaa
gcctacgatgattacatcctttatgtatacgattcaagagcagatggagcgccacagaaa
attgatcatgccgtcatcggcggagttgtcgcagtggttgtgttcgccatgctttgtctc
ctgattgttcttggccgatatttcgccagacacaaagggacctacttcacccacgaagct
aaaggagcggatgacgcggcggacgccgacactgccatcatcaacgcagagggcggacac
aacaattcggatgacaagaaggaatactacatttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (10)   
   Pfam (10)   
All databases (32)   

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