KEGG   Danio rerio (zebrafish): 562894
Entry
562894            CDS       T01004                                 
Symbol
rint1
Name
(RefSeq) RAD50-interacting protein 1
  KO
K20474  RAD50-interacting protein 1
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    562894 (rint1)
Membrane trafficking [BR:dre04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   NRZ (DSL1) complex
    562894 (rint1)
SSDB
Motif
Pfam: RINT1_TIP1 Rab5-bind
Other DBs
NCBI-GeneID: 562894
NCBI-ProteinID: NP_001038468
ZFIN: ZDB-GENE-041210-174
Ensembl: ENSDARG00000005547
UniProt: Q05AM7
Position
4:complement(18500147..18512551)
AA seq 780 aa
MAAPMMEHNNHSNMVLSDLKLVDSTKSDSPSEDGNPEDDIVALVQKEIGGDLKSLKKVSG
LLEKLTLENKQLEEQVQTVSSSGPLRVSAALRAAEESQKKLGSLLENERLLSNKLQQHLQ
GAQVWTDSIGQVLGQLDTLEKHMKYLQCLARIEELSDSIQQYLMTNSVWDAVRAIDSMAS
LDMDLRESGCLHLQAFLRETLRFWHKILKDKLTSDFEEVLTQLHWPFISAPTQTLSPPAN
AQELNSQLELLVSQLLSLQTSDDLISENKETSSRPGQSQTPPLSLPIQIMLLPLSKRFRY
HFTGNRQTNSLSKPEWYLTQILIWMGNNSNFMDEKVQPILDRAGGNVNARVELCRGLLTL
AQEKLAHDAPRLLYDDALFCHLVDEVLQFEKELRSTHSYPRAYPGVLHILLEESVFQKWL
SVERKMAVEKVDAMLSAEGAWSSQYKDITDMDELKAPDCAETFMTLLLVITERYRSLPCQ
RAQLSFLALQKELVDDFRIRLTQVMKEESRQPLSSRYSAILNAANYISTVLSDWGDNVFF
LQLQQAAVSVGEEILGPLGATESGRLASLEGSLFEELLALLERLRGDMLGRLLDAVMRDV
KEKAQPYCKDRWISLPSQSDQATMSLSSSACPMMLCLRDHLLQLQQMLCLPLFQMFWQGL
AERLDCFIYEDLILYNHFNEGGAAQLQYDMTRNLFPLFGHYCKRPENFFKHVKEACIILT
LKVGPALLLLDVLKQSEEDSLPNHQQSSPESALNELGIYKLAPSDVQILLNLRSAWLNQS
NT seq 2343 nt   +upstreamnt  +downstreamnt
atggcagcgcctatgatggagcacaacaaccacagtaacatggttctttctgatctgaaa
ctagtagacagcactaaatctgactctccttcagaagatggaaaccctgaagacgatata
gttgctcttgtgcagaaggagatcggtggagatctgaagtcgctaaagaaggtgtctggg
cttttggagaaactgacattagagaacaagcagctagaagagcaggtgcagacagtgtcg
tcttcggggccgctgcgtgtgtctgcagctctgcgtgcagcagaggagtctcagaagaag
ctggggtctctactggagaacgagaggctgttgtctaacaaactgcagcagcatctgcag
ggtgcacaggtctggactgacagcatcgggcaggtcctggggcagctggacacattagag
aaacatatgaagtacctgcaatgcctggcacgtattgaagagctcagtgacagtatccag
cagtatctgatgaccaatagtgtgtgggatgcggtcagagccattgacagtatggcgtct
ctggatatggatttgagggagtcaggctgtctccacctgcaggctttcctcagagagaca
cttcggttttggcacaagatccttaaagacaaactgaccagtgatttcgaggaagtcctg
acgcagttacactggccgttcatctcagccccgacacagactctctctcctccagcaaac
gcacaggagctcaacagccagctggagctgctcgtctcccagcttctgtctctacagacc
tctgatgaccttatatcagagaataaagaaacatcatctcgtcctggacagtcccagact
cctccactctcgctgcccattcagatcatgctgcttccccttagcaaaaggttcaggtat
cacttcaccggaaaccgtcagaccaacagcttaagcaagccagagtggtatttgactcag
atcctcatttggatgggaaacaactccaactttatggatgagaaggttcagcctatattg
gatcgtgctggaggcaatgttaacgcaagggtggagctctgcagaggtctgctcactctg
gcgcaggaaaagcttgcccacgatgctccccgattgctctacgatgacgctctcttctgc
catctagtggacgaggtgttgcagtttgaaaaagagttgcgcagcacccacagttacccg
cgtgcttaccccggtgtcctccacatattgctagaggagagcgtgtttcaaaagtggctc
agtgtggagagaaagatggctgttgagaaagtggacgccatgctgtctgcagaaggagcc
tggagctctcaatataaagacattactgatatggatgagctcaaagcaccagactgtgca
gagaccttcatgacccttctactggtcatcacagaacgataccgctctctgccatgtcag
cgggctcagctcagtttcctggcattgcagaaggagctggtggatgattttcgtatccgc
ctcacgcaggtcatgaaagaagagtcccgacagccactgagctcccgttactccgccatc
ctcaacgctgccaactacatctccactgttctcagtgactggggtgacaatgttttcttc
ttgcagttgcagcaggctgcagtttcagtgggcgaggaaatcctgggccctttaggggcc
acagagagcggcagactggcctctctggagggatctttgtttgaggaactgttggctctg
ttggagaggctgcgaggagacatgctgggccgattactagacgcagtcatgagagacgtc
aaggagaaggcacagccatactgcaaagacagatggatctccttgccatcgcaaagcgac
caggccactatgtcgttatccagttctgcatgtcccatgatgctttgcctgcgggatcac
ctgctccaactgcagcagatgttgtgtcttcctctatttcagatgttttggcagggcctc
gctgagagactcgactgcttcatctatgaggatctcatcctttataaccatttcaatgaa
ggcggcgctgcacagcttcaatacgacatgaccagaaacctttttcctctgtttggacac
tactgcaagagaccagaaaacttcttcaaacatgtgaaggaggcctgcatcatcttgact
ctaaaagtgggtccggcgctgttgctattagacgttttgaaacagtcagaagaagatagt
cttcccaaccatcaacagtccagtccagaatctgcactcaatgagctgggaatctacaaa
ctggccccgagtgacgtgcagatcctcctgaacctccgctcagcctggctcaatcaatca
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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