KEGG   Danio rerio (zebrafish): 563733
Entry
563733            CDS       T01004                                 
Symbol
ubap2a
Name
(RefSeq) ubiquitin-associated protein 2a
  KO
K26545  ubiquitin-associated protein 2
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dre04121]
    563733 (ubap2a)
   03400 DNA repair and recombination proteins [BR:dre03400]
    563733 (ubap2a)
Ubiquitin system [BR:dre04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Multi subunit type E3 associated proteins
    563733 (ubap2a)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     563733 (ubap2a)
SSDB
Motif
Pfam: UBAP2-Lig GIP1_N UBA_4 Methyltransf_32
Other DBs
NCBI-GeneID: 563733
NCBI-ProteinID: NP_001076307
ZFIN: ZDB-GENE-070424-16
Ensembl: ENSDARG00000088318
UniProt: A3KNA8
Position
21:11916763..11955313
AA seq 1168 aa
MSSVGVERARGTRDKALPTTTQTTQPQKQLQATAEQIRLAQMIYDKNDADFEDKVKQLME
VTGKNQDDCMVALHDCNEDVNRAINFLLEGTSDATSWETVGKKKSIGKDGPSSESKENKE
NREKKERESSKGRGGPSRRGRGTSRNRPARTEENGVDPAPVERGADRGRRGRGRVSGGRG
RGRAPATSRFTAQGMGTFNPADYTTDSGTSNSHADVWETGANDTTDGTVAWQNTLDEWAA
EDWSEDVSLSETKVFTSSCAPPTENHITPGQSLDLSTLLQKPVDREEVGGLKAVGSSQGL
GHSLVFTNSHHQPARNGGTPAGSNSYTHATLSSVLGSGFGELGGPKLGQTAGQQILEQLK
GPGLGQLTSQPSSTGTNCTPVGGLVGTGMSVPSSSWDIKPPGTQSSTSLPSQFSREFQMQ
PEPSLVLSQLAQRQQSSLTHTGPLARQPSPPPLSTPSTAQGTLEAFPKAPEPSQHRDGPS
MAPSQTGDSQGSSTQQRQIKTQKRRIPPTSKIPASAVEMPGSADVSGLNVQFGALDFGSE
SALPDFSQSENCSSEPIRETAVVSQSQSSLYSKPISESLSSPVPLLLPLASSDSIYPSPS
VPLPSLAPSHSTPSSATAPSSSSSSSSSSAASSAGNSFDCGVAPHSRLTFSQSKEPSGPV
TNGFNGARTSAALDTTSSSSTPKQESPSLVSNTSVAPSAPSSLLPSSVTPHSSALPSLAS
ELSSASLPPLSSHVSSGHPSVSALCTTSSHTYTSVDSVNSLAPSSMAFSSPPVSALASSS
MNNSVSGGNSLHGPGVLGHGPNGSTPSAVRTAQLLSSSSGKAPPNLSQGVPPLLPNQYIM
GPGGLLPAYPQIYGYEDLHMLQSRLPMDYYGITFPGPTAPLSGRDGSLASNPYSDDVTKF
GRGESTSPAPSSSLSAAHAPQTAQPPQAQSQGQNQPQPQGHHNTQQPFLNPALPPGYSYT
GLPYYPGVPGVPSAFQYGPTMFVPPASAKQHGMGLSNPTTPFQQPSGYGQHAFSSGYDDL
TQGPAGSDYSKGYSNSSQTQAKSAASGPGKGVSVTSSNSGVPDISGTVYNKTQPFEKQGF
HAGTPPPFNLPSALGGTGPLTPGAAPGYAPAPFLHILPAHQQPHSQLLHHHLTQDGQGGP
SQRSQSSTMQQKTQVNKSNYGSSPYWGN
NT seq 3507 nt   +upstreamnt  +downstreamnt
atgagctcagtgggcgtcgaacgagcccggggcactcgggacaaagcgctgcccactacc
acacagaccacacaaccacagaaacagcttcaggctacagccgaacagatccgtctggcc
cagatgatctatgacaagaacgatgcagatttcgaggacaaagtgaaacagttaatggag
gttacagggaagaaccaagacgattgcatggttgctcttcacgactgtaatgaggacgtc
aacagagccatcaacttcctgctcgagggaacatctgatgcgacctcttgggaaacggtg
gggaaaaagaaaagtatcgggaaggatggaccctcgtctgagagtaaggaaaacaaggaa
aatagggagaagaaagagagggaaagcagcaagggtcgtggagggccgagccgccggggc
cgagggaccagtcgcaacaggcctgcaaggactgaagagaatggtgtggaccctgctcct
gttgagagaggtgctgaccgagggcgtaggggaagagggagagtgtctggaggtcgaggc
agaggtcgggctccggctaccagcaggtttacagcacagggcatggggacctttaaccct
gcagactacaccacagacagtgggacatcaaactcacatgctgatgtgtgggagacaggg
gccaatgacactacagatgggacagtggcatggcagaacactctggacgagtgggcagct
gaagactggagtgaagatgtgagtctctctgagaccaaagtgttcacttcctcttgtgca
cctccaactgagaaccacatcacacctggccaaagcctggatctgtcaactctgctgcag
aagcctgtggaccgagaggaggtgggaggtctcaaggccgtgggctcctctcaggggctt
ggccacagtctggtcttcaccaactcccaccaccagcctgctcgaaacggaggcacacct
gctggctccaacagctacacacatgccaccctgtcctctgttttgggttctggttttgga
gagctgggtggtccaaaactcgggcagacggctgggcagcaaatactggaacagctgaag
gggcctggtcttgggcagcttacctcccagccctctagcacagggaccaactgcacccct
gtaggggggctggtggggacggggatgtctgtcccctcctcctcctgggacatcaaacct
cctggaacacagagctctacttccctcccctcccaattcagtcgagagtttcaaatgcag
ccagagccatctttggtgctaagccaactcgcccagcggcagcaaagctccctgacccac
acggggcctcttgccaggcagcccagccctccccctttaagtaccccatcgactgcccag
ggcacactggaagcctttccgaaagcgccagaaccttctcagcaccgtgatgggccctcg
atggccccctcacagacaggcgactctcagggcagcagcacacagcagcggcagataaag
actcaaaagcgacggatacctcccacttccaagatccccgcgtctgcagtagagatgcct
ggctcagcagatgtgtctggtctcaatgtgcagtttggtgccctggactttggttcagaa
tctgccctgccggacttcagccaatcggagaactgcagcagtgaacccataagagagact
gcagtagtttctcagtcacaaagcagcctttactctaaaccaatcagtgaatctctgagc
agtccggtccctttgctgctgcctctggcctcttctgacagcatctacccctctccctca
gtccctctcccaagcctcgccccgtcccacagcacccccagctcggccacagctccctcg
tcctcctcttcctcctcttcctcgtccgctgcatcatcggcggggaacagctttgactgc
ggtgtggctcctcactcaagactgaccttttcacagagcaaggagccttctggacctgtg
acaaacggtttcaatggtgcgaggacctctgctgctttagacaccacatcgagttcctcc
actccaaaacaagagtccccctctctggttagcaacacaagtgttgctccatctgcccca
tcctcgctgctgccctcttctgttacaccacacagctctgctttgcccagcctggcatct
gagctgtcctccgccagtttacctccgctcagcagtcatgtgagcagtggccatccctct
gtgtcggcactttgcaccacatcttcacatacatataccagtgtggacagcgtcaactct
ctcgccccctcgtccatggcgttttcctccccgccagtgtctgctctggccagcagtagc
atgaacaactcagtgagcggtgggaacagtctgcatgggcctggagttttgggtcatggc
cccaacggtagcacgccttctgctgtcaggacggcccagctactgtcttcttccagcggt
aaagctcctcctaatctctctcagggggttcctccactgctgcctaaccagtacatcatg
ggacccggaggtctgctgcctgcctacccgcagatttatggctacgaggacctccacatg
ctacaatccagactaccaatggattactatggaatcacattcccagggcccaccgctccg
ctgtctggcagagatgggagcctcgccagcaacccttactcagatgatgtcacaaagttt
ggccgaggagaatccacctcaccagcgccctctagcagcctgtctgcagctcacgcccca
cagacagcacagcctccgcaggcacagagccaaggccagaaccagcctcagccgcagggc
caccacaacactcaacagcccttcctcaacccagctctgccccccggatatagctacacg
ggcctgccctactaccctggggtgcccggcgtgcccagtgcattccagtacggacccacc
atgtttgtcccccctgcctcggccaaacagcatggcatgggactcagcaaccccacaacg
ccattccagcagcccagtggctacggccagcatgccttcagctcagggtatgatgacctg
acgcaaggcccagcaggatccgattacagcaaaggctatagtaactcctctcaaacacag
gccaaatctgctgcctctggcccagggaaaggtgtctctgtgacatctagcaattctggg
gtgccagacatcagtggaactgtttacaataaaacacagccgttcgagaagcagggtttc
catgctggcacacctccacctttcaacctcccgtctgctcttggtggcacaggacctttg
acccctggagctgccccaggttatgctcctgctccattccttcacattctgcctgctcac
cagcagccccactctcagctgctccaccatcacctcacccaggacggacagggagggcca
agccagaggagccagtccagcaccatgcagcagaagacccaggtcaacaagtccaactat
ggcagctctccttactggggcaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (51)   
   KEGG ORTHOLOGY (1)   
   RefGene (45)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (8)   
   UniProt (1)   
   RefSeq(pep) (7)   
DNA sequence (9)   
   RefSeq(nuc) (7)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (76)   

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