KEGG   Danio rerio (zebrafish): 564717
Entry
564717            CDS       T01004                                 
Symbol
si:dkey-220f10.4
Name
(RefSeq) tubby protein homolog isoform X1
  KO
K19600  tubby and related proteins
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:dre03037]
    564717 (si:dkey-220f10.4)
   04990 Domain-containing proteins not elsewhere classified [BR:dre04990]
    564717 (si:dkey-220f10.4)
Cilium and associated proteins [BR:dre03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   564717 (si:dkey-220f10.4)
Domain-containing proteins not elsewhere classified [BR:dre04990]
 Other domain-containing proteins
  Tubby family proteins
   564717 (si:dkey-220f10.4)
SSDB
Motif
Pfam: Tub Tub_N
Other DBs
NCBI-GeneID: 564717
NCBI-ProteinID: XP_003199647
ZFIN: ZDB-GENE-030131-9651
Ensembl: ENSDARG00000062902
UniProt: Q1L8C0
Position
12:20618277..20625916
AA seq 556 aa
MEDAEVRQQKLDNQRSLLIKKQQRRRADARMVTANPDICSKTRKQKPECDDTVLLISQSQ
SNTSLNDTQPEHIYENTVEEICLGELSVSSRTEEASEEIAQTVPVIIKKIDLEISPKHST
TSTLDTDGQADEKKTKKKGVKKGQTKLLEPKAALEVEENEKKEKKSVKKKEKTNGTKGRA
KTGEQSSVQTDSVVDFSINEEKKPESESEDEGKDWSKSPVPPTPKKKQMKPMRCHLSDSE
EENDEKEEKDKKKEAKKTPKKSKKNTKSVNSLASLNSNYKEHSSDSDSSDIGKSSPMSLE
DLEQFAMRPAPRDVTIQCRITRDRRGVEKGIYPTYYLHMEKEDGKRVFLMAGRKRKKCKT
SNYLISVDPTDLSRDTDSYIGKLRSNVLGTKFTVFDNGENPERKPFIKEMDTLRQELAAI
FYEKNVLGFKGPRKMTVIIPGMHENDERVVIRPKSELESLLTRYENGNKENLVTLVNKSP
SWNEQTQSYVLNFHGRVTQASVKNFQIVHPDNVDYIVMQFGRVADDVFSMDYSFPMCALQ
AFAITLSSFDGKLACE
NT seq 1671 nt   +upstreamnt  +downstreamnt
atggaagatgcagaggttcgacaacagaagctggacaatcagcgttcacttttaatcaag
aaacaacaaagacgaagggcagatgcccggatggttacagcgaatcctgacatctgttcc
aagacacgcaaacagaaacctgagtgtgacgatactgttttattgataagccaatctcaa
agcaatacttccctcaatgacacacaacctgagcatatttatgaaaacacagtggaggag
atttgtttgggagaactgagtgtttcatccaggacagaagaggcatcagaggaaattgct
cagactgtcccggtcatcattaagaaaatcgatctagagatcagcccgaagcacagcact
acaagcactttagacacagacggccaggcagatgaaaagaaaacaaagaagaagggtgtg
aaaaagggacaaactaaactacttgaaccaaaagctgcactggaggtggaggaaaatgaa
aagaaagagaagaaatctgtgaagaagaaggaaaagacaaatggaactaaagggagagca
aagacaggggaacagtcctcagttcagactgattcagttgtggatttctccattaatgaa
gagaaaaaacctgaatcagagagtgaagatgaaggaaaagactggtcaaagagccctgtt
cctcctacaccaaagaaaaaacaaatgaagccaatgagatgtcatctcagtgacagtgaa
gaagaaaacgatgagaaagaggagaaggacaagaagaaggaagctaaaaaaacaccaaaa
aagtctaaaaaaaacacaaaaagtgttaacagtcttgcctctttgaactccaactataag
gagcactcttctgacagtgattcttccgacatcggaaaatcgtctcccatgtctttggag
gatctggaacagtttgccatgcgtcctgctccaagagacgtgaccattcagtgcaggatc
accagagacaggagaggagtggagaaagggatctaccccacttattacctccacatggag
aaagaggatgggaaacgggtctttctgatggctggcaggaaaagaaaaaagtgcaaaacg
tccaattatttgatatcagttgatcctacagatttatccagagatactgacagctacatt
ggaaaattaaggtcaaatgtcttggggactaagttcactgtgtttgataatggtgagaat
cctgaaaggaaaccatttattaaagaaatggatacactgcgacaagagctagcagcaata
ttttatgaaaaaaatgttctgggtttcaaaggtccccgcaaaatgacagtaattattcct
ggtatgcacgaaaatgatgagagagtcgttattcgaccaaaaagcgagctggagtctctg
ctcacccgatacgagaacggtaataaagagaatcttgtcactctagtcaataaatcaccc
agctggaatgagcaaactcagtcgtatgtgcttaattttcatggccgagttactcaggca
tctgtcaaaaactttcagattgtccatccagataatgtggactacattgtaatgcagttt
ggccgggttgcagacgatgtgttttccatggactacagctttcccatgtgtgctctacag
gcatttgctatcacactgtcctcatttgatggcaaactagcatgtgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (51)   

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