KEGG   Danio rerio (zebrafish): 567105
Entry
567105            CDS       T01004                                 
Symbol
taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A
  KO
K15212  TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dre03021]
    567105 (taf1a)
Transcription machinery [BR:dre03021]
 Eukaryotic type
  RNA polymerase I system
   Basal transcription factors
    SL1/TIF-1B
     567105 (taf1a)
SSDB
Motif
Pfam: TAF1_subA
Other DBs
NCBI-GeneID: 567105
NCBI-ProteinID: NP_001038739
ZFIN: ZDB-GENE-041014-272
Ensembl: ENSDARG00000052471
UniProt: Q1JQ67
Position
20:51813410..51874287
AA seq 448 aa
MDDIEAELNIAETHADFTQDESEHRQRLKRPVQLHCQVKDRGFFTGIYFLKCNRKCLELL
REAMLHHRWQEAVGYFSSYIQTLEAKTYNSYQSVVAEILWRLGTEILHHLPNTSNEDFNA
LYEQLKNVGVLNFSKISLEHCYHLLLNGQMDEAKRQLSIAESWRYGRVSRSQSLSKTLIT
AYCGLLDYLIWNEKKSSVSENEELSSNHEMHSYFRQASVTLKDIISLPGIWDPFVLSYVN
MLEFYKQEESALQALENYAYNKEFPSNPNAHVYLYQFLKRHDAPREKLISTLRILHSLVP
SHELMLELCNLLLGTLERSDTEEALAVCMDLLEFSSWKTDIRAWDCLLTILKKIRKKKWQ
EIIQKEWKVRRSLWVPLHFRDFLSLKDWMDNHKLMMIIKKDCLRIINENMREYCRVAAIA
EKEVLLQIRMKRKKKQHKIQTAITELTN
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggatgacatcgaagctgagctcaacattgcagaaacacacgcggattttacacaagat
gaaagtgaacatcggcaacggctgaaaagaccagtccagcttcactgtcaagttaaagac
cgaggttttttcacagggatctactttctgaagtgcaacagaaagtgtctggagctgctg
agagaagcgatgctgcatcatcggtggcaggaggctgtgggatatttcagctcttacatt
cagacactggaggccaaaacatacaatagttatcagtctgtggttgcggagatcttgtgg
agattgggcacagaaatcctgcatcatctcccaaacactagcaatgaagatttcaacgct
ttatatgaacagctgaagaacgtcggggtcctcaacttctcaaagattagtctggagcac
tgctatcatctcctgctgaacggacagatggatgaagccaaacggcagctttccatcgca
gagagctggagatacggaagggtatcccgatctcaatcactgagcaaaacgctgatcaca
gcctactgcggcttactggattacttgatctggaacgagaagaagtcctctgtgtctgaa
aacgaggagctgagcagtaatcatgagatgcacagttacttcagacaggcgtcagtgact
ctgaaggacatcatcagtctgcctggaatctgggacccatttgtgctgagctacgttaat
atgttggagttttataagcaggaggagagcgctctacaggctttggagaattacgcatac
aacaaggagtttccatcgaacccaaacgctcatgtttatctgtaccagttcctgaagaga
cacgacgctccaagggaaaagctcatcagcacattgaggattctgcactctttagtcccg
agtcatgagctgatgctggagctctgcaatctcctgctgggtacattggaaaggagtgac
actgaagaagctctcgctgtttgtatggaccttctggagttttccagctggaaaactgat
attagggcttgggactgcctattgacaattttgaagaaaattagaaagaagaagtggcag
gagattatacagaaggagtggaaggtgcggcgttcgctctgggtacctttacacttcaga
gacttcctcagcctcaaagactggatggacaaccataaacttatgatgatcatcaagaag
gactgtctgaggatcatcaatgaaaacatgagagaatactgtcgagtcgctgcaatcgct
gagaaagaagtcctcctgcagataagaatgaaacgaaaaaagaagcagcacaaaatacag
acggccattactgaactgacaaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (34)   

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