KEGG   Danio rerio (zebrafish): 567995
Entry
567995            CDS       T01004                                 
Symbol
fbxo18
Name
(RefSeq) F-box DNA helicase 1
  KO
K10300  F-box DNA helicase 1 [EC:5.6.2.4]
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dre04121]
    567995 (fbxo18)
Enzymes [BR:dre01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     567995 (fbxo18)
Ubiquitin system [BR:dre04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     567995 (fbxo18)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C UvrD_C_2 F-box-like F-box AAA_19 Viral_helicase1 AAA_30 PhoH AAA_11 ResIII AAA_22 AAA_12
Other DBs
NCBI-GeneID: 567995
NCBI-ProteinID: NP_001038614
ZFIN: ZDB-GENE-041210-99
Ensembl: ENSDARG00000062983
UniProt: E9QBZ9
Position
4:complement(9853510..9867814)
AA seq 992 aa
MFPIGRAKRRHLGPSECNDLAQSNTGSQSLTQPFSVSLNNRDPNQRLQPRTPTKRRRRGT
VSFISSDGAGQQKGITDFFSVTGVISSSPQKGTKTPIKNEEEEEEKCIPQEENVEEDFME
GITEDMFDDDFEMEIVSVKKEQAEVAVNKGDEEDSVEALPDAHFGLLGVRGGQEVPQGHV
QDLPEEILREVFALLPAQDLFQHISLVCRHWRDVVMDPKFLPWKKLYCRYRKRETEGVKE
VRSILDANQISKKEDLCLLNMLRYMSGFKHSKRVNVEDVLTCIKRHRLYTHAEACMKDRL
PDMVDEEGPNPWSAMALLLILADGVKDILDLVALLRRSGCLLTTGGISEYLWAVATLLLA
MRERNINISNRWHYNIFYVLHLMENASPTSLKDNRQLITHEQQQILNHDIQHHHVVKIMA
FAGTGKTTTLVKYAQQRPDLRFLYLAFNKSVAVQANRLFPHNVECSTVHSMAYRSVGVRY
KNIRKLSSNLKPFDVAWVLPKGHGGFVNAKVVTQTLNNYWASTDQRVDTQHVPFEYKNTK
GLREQPDEEAKRTFVSLAQNIWDQMVEMRTRRDRVYNMTHDGYLKLWQLENPVLDRYDAI
FIDEAQDCTPVIMDIMLSQRCGKILVGDPHQQIYTFRGAVNALYFVQHTHIYYLTQSFRF
GSEIAYVGASILDGCKGVKQILVGGHQDGSVAILSRCNVTVFSEAVRLTEVNPNCKICIV
GGVENFGLDKIMDIWVLTQSEDTRKKDNLKIKDFFIRNFCKEKMGGFMGLKGYAIASEDR
ELEGKLAMVEKYNKRIPELVRRIYDCAQGSPQDADFILGTVHKSKGLEFDVVVVTDDFAK
VPCARHNLRRAGGFSIDNVPDDEWNLIYVAITRAKKTLYISKTITNLITFTGEYFLRSEQ
TSSLLSKDPALTCSTKDCENQISADSVLSMCKLPVRYMDSVDAGGVQCLTCVEQRVGPTA
FLLSPPERVRSMPYTNERIDLPINVAMLLALL
NT seq 2979 nt   +upstreamnt  +downstreamnt
atgtttccaataggaagggccaaacgcaggcatctggggccctcagaatgtaacgatctg
gctcaaagcaacactgggagccagtctcttacacagccattcagtgtcagtctcaacaac
agagatccaaaccaaagacttcagcctaggacacccacgaaaagaagaagacgtggtact
gtctcattcatatcttcagatggtgcaggacaacagaagggcatcactgatttcttctcc
gtcactggagtcatcagttccagcccgcaaaaaggaaccaaaactcctataaagaatgag
gaggaggaggaagaaaaatgcatcccacaagaggaaaatgttgaagaggacttcatggaa
ggaatcacagaggacatgtttgatgatgactttgagatggaaattgtatcggtcaaaaaa
gagcaggcggaggttgctgtgaacaaaggagacgaagaggactcggtggaagctcttcct
gatgcccattttgggctgctgggagtgcggggagggcaggaggtgccacagggtcacgtc
caggatctgcccgaagagatcctaagggaagttttcgctcttctccctgctcaggatctc
tttcagcacatcagtctggtgtgccgtcactggagagacgtggtcatggaccccaagttt
cttccttggaagaagttgtactgcagataccgcaaacgggaaaccgagggtgttaaggag
gtgaggtctatcctggatgctaatcaaattagcaaaaaggaggacctgtgtctcctcaac
atgctgaggtatatgtcagggttcaaacacagcaaacgggtgaatgtggaggatgtgttg
acatgtattaaaagacaccggctgtacactcacgctgaagcttgtatgaaagatagactc
ccagacatggtggatgaagagggtccaaacccttggtctgccatggcactgttgttgatt
ttagctgacggagtgaaagatatcctggacctggtagctcttctgcggagatctggctgt
ctgctgaccacaggggggatttctgaatacctgtgggcagtggcgactttacttctggcc
atgagagagcggaatattaacataagcaacaggtggcactacaacatcttttatgtcttg
cacttgatggaaaatgcatctccaacaagcctgaaagacaacaggcagcttatcactcac
gaacagcagcagattctcaaccacgacatccagcatcatcacgttgtcaaaataatggct
tttgcaggcactggaaagacaaccacgctagtgaaatatgctcagcagaggccagacctg
cgcttcctctatctggcctttaacaaatctgtagcggtgcaagccaatcggttatttcca
cacaacgtcgaatgcagcaccgtccattcaatggcctacagatctgtgggagtgaggtat
aagaatatcaggaaactgtcaagtaatttgaagccatttgatgtggcgtgggtcttaccg
aaaggacatggaggattcgtcaatgctaaagtcgtgacgcaaacgcttaacaactactgg
gcgtccacagaccagcgtgtcgacacgcaacacgtcccgttcgagtacaagaatacaaaa
ggcttaagggaacagccagatgaagaggccaaaaggacctttgtgagtctcgcgcagaac
atatgggaccaaatggtcgagatgcggaccagaagagaccgagtgtacaacatgacccat
gatggatacctcaaactctggcagctggaaaatccagtcctggaccgatatgatgccata
tttattgatgaagctcaagactgtacgccagtcatcatggacatcatgctctcccagcgc
tgtgggaaaatcctggttggagatcctcatcagcagatctacactttcagaggagcagtc
aacgctttgtattttgttcaacacacacacatctactatctcacacagagctttaggttt
ggctctgaaattgcgtatgttggtgcttcaatattggacggctgtaaaggagtgaaacag
atattggttggcggccatcaggatggaagtgtggcgattctgagccgctgtaatgtcacg
gttttcagcgaggctgtgcggctcactgaagtcaaccctaactgcaagatctgcattgtg
ggaggtgttgaaaactttggactggacaaaattatggatatctgggtcctgacacaatct
gaagacacgcgcaagaaagacaacctcaagatcaaggatttcttcatccggaatttctgc
aaagaaaagatgggtggattcatgggtctgaagggatacgccatagcctcagaggaccgc
gagctggagggcaagctggccatggtggaaaaatacaacaaacgtattccagagctggtt
agacgcatctacgattgtgcccagggaagtccacaggatgcagattttatccttggcacg
gtgcataaatcaaaaggcctggagtttgatgtagttgttgtgaccgatgactttgcaaaa
gtaccatgtgctcgacacaacttgcggagagccggtggtttcagtatagataacgtccca
gatgacgagtggaacctgatatacgtggccatcactcgagccaagaaaaccctttacatc
agtaagaccatcaccaatctcatcacattcactggggagtatttcctgagatcagagcag
accagctctctgctgagtaaagatccagcgctcacctgctcaactaaggactgtgagaac
caaatcagcgcagactccgtcctcagcatgtgcaaactccccgtcagatatatggacagt
gtggacgcgggtggtgttcagtgtttgacttgcgtggagcagcgtgtgggacctacagcc
tttctgctctctcctcctgaacgggttcggtccatgccatacacgaatgaaaggatagac
ctgcctatcaacgtcgccatgctcttggccttgctgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (13)   
   Pfam (13)   
All databases (67)   

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