KEGG   Danio rerio (zebrafish): 568211
Entry
568211            CDS       T01004                                 
Symbol
cngb1a
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1 isoform X10
  KO
K04952  cyclic nucleotide gated channel beta 1
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04744  Phototransduction
Brite
KEGG Orthology (KO) [BR:dre00001]
 09150 Organismal Systems
  09157 Sensory system
   04744 Phototransduction
    568211 (cngb1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:dre04040]
    568211 (cngb1a)
Ion channels [BR:dre04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (CNG)
   568211 (cngb1a)
SSDB
Motif
Pfam: cNMP_binding Pyr_redox_3
Other DBs
NCBI-GeneID: 568211
NCBI-ProteinID: XP_005159301
ZFIN: ZDB-GENE-050419-164
Ensembl: ENSDARG00000068242
UniProt: A0A8M2B661
Position
18:45456638..45520019
AA seq 761 aa
MTLPKIIVPPESDSMTLTVPGANLTARSKVVDSESKPEDLEEAVPGGEDEEGKMDVNKSD
LLNVDEGLERPMSAASQTSIVVHERLQELVKLFKGRTERRRDKLVDPDESDDESPSASPA
KKPGEAPPPPPPPEQKKEAEEKPVEEEEEEVQIYEFMGYKIPVPQFKIPQMPEWLRAILA
YRFPSSIDPYTDLIYVVWLFFVTFAWNWNVWLIPVRCTFPYQTPDNIHWWLLMDYFCDSI
YIMDIFVVQPRLQFVRGGDIVCDKNDMRENYRQTERFKMDVISLFPLDVLYVFTGVKSLL
RFPRLLKYNAFFEFNDRLEAWMSKAYIYRVIRTSAYLLYSLHCNACIFYWGSDYEGLGST
KWVYNGKGNSYIRCYYFAVKTLITIGGLPDPTTVFEIVFQLVNYFVGVFAFSIMIGQMRD
VIGAATAGEAYYRHSVDSTVKYMTSYRIPRDVQNRIKTWYDYTWKSQGMLDEQELLIQLP
DKMRLDIAADVNYSIVSKVALFQGCDRQMIFDMLKRLKSVVYLPGDFVCEKGEIGREMYI
IKAGEVQVVGGPDGKTVFVTLRAGSVFGEISLLAGGGGNRRTANVKAHGFANLFILDKKD
LAEILVHYPESQKLLRKKAKKMLTKDKKPAEAKGEVKDTGEVIPQRPETPKLYKAALEVA
TGQTFSRLKEAYKGATLEPSTPISGMSSTGPVPPPSPMHRRSPIPRPQILDEDDMVSETT
DSTVIIRMTPRVEGEEILSVEISPAEGAEAEMEEPQKTEDK
NT seq 2286 nt   +upstreamnt  +downstreamnt
atgacccttcccaaaatcattgtcccgccagagtcagattcaatgaccctcactgttcct
ggagcaaatctcacagcccgcagcaaagttgtggattcagaaagcaaaccagaagatcta
gaggaggcagttcctgggggagaagatgaagaaggcaaaatggatgtgaacaagtctgat
ctgctgaatgtggatgaaggccttgagcgtcccatgtcagcagccagtcaaaccagtatc
gttgtgcatgagcgtctgcaggagctggtcaagctgtttaagggccgaactgaacgtaga
cgagacaaactggtggatccagatgagtctgatgatgaaagcccttcagcatctccagcc
aagaagcctggcgaagcgccgcctccaccacctccaccagagcagaagaaagaggctgaa
gagaagcctgtggaggaggaagaggaggaagtgcagatctatgagttcatgggctacaag
atcccagttccccaattcaaaatcccccagatgcctgagtggctgagagccattctggca
taccgcttcccctccagcattgacccttacactgatctgatctacgtggtgtggctgttc
ttcgtgacgtttgcgtggaactggaatgtttggctgattcctgtgcgctgcactttcccc
tatcagacgcctgacaacattcactggtggctgctgatggactacttctgtgactccatc
tacatcatggacatcttcgtggttcagccacgactgcagttcgtcagaggaggagacatt
gtgtgcgacaaaaacgacatgagagagaactacaggcaaacagagcgatttaagatggat
gtgatcagtctctttccactggatgtcctctatgtcttcactggtgtcaaatctctctta
cggtttcctcgtcttctaaagtacaacgcgttcttcgagtttaatgatcgtctggaggct
tggatgagcaaagcctacatttacagggtgatccgtacaagtgcgtatctgctgtactct
ctgcactgcaatgcctgtattttctattggggctcggactatgagggactgggctccacc
aaatgggtttataatggcaaagggaacagttacatccgctgctattacttcgctgtcaag
actctgatcaccatcggaggtttgccggaccccaccactgtctttgaaattgtctttcag
ctggttaactacttcgtgggggtcttcgctttctccattatgatcggtcagatgagagac
gtgatcggagccgctacagcaggagaagcgtattatagacactctgtggacagcactgtc
aaatacatgacctcctacaggatcccccgcgacgtccagaaccgcattaagacttggtat
gactacacctggaagtctcagggcatgctggatgaacaggagctgctcatacaactgcca
gataagatgcgtttggacatcgctgctgatgtcaactacagcatcgtcagtaaggtggcg
ctctttcagggatgtgaccgacagatgatattcgatatgctcaagaggttgaaatctgtg
gtgtatcttccaggagactttgtctgtgaaaaaggagagatcggccgagagatgtacatc
atcaaagctggagaggtgcaggtggtcggagggcctgatgggaagacggtgtttgtgact
ctgagagctggctctgtgtttggggaaatcagtttgctggcaggtggtggtggaaaccga
cgaacagctaatgtaaaagcgcatggtttcgctaacctcttcatcttggacaagaaggac
ctggcagagatcttagtgcactatcccgaatcccagaaactgctgcgcaagaaggccaag
aagatgttgaccaaagataagaagcctgcagaagcgaagggcgaggttaaagacacgggt
gaggttattcctcagcggcccgagactcccaaactctacaaggcagccctagaggtcgcc
acaggacagacgttttcccggctgaaggaggcttataagggagcaactctagagccgtcc
acccctatatccggcatgagctccacaggtccagtgccgccaccatcccccatgcaccgc
cggtcccccattccccggcctcaaattctagatgaagacgacatggtgtccgagaccacc
gacagcaccgtgatcattcgcatgactccccgcgtggagggagaggagattctgtctgtg
gaaatcagtcctgcggagggagcagaagcagagatggaggagccccaaaaaactgaagac
aagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (11)   
   UniProt (1)   
   RefSeq(pep) (10)   
DNA sequence (12)   
   RefSeq(nuc) (10)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (54)   

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