KEGG   Danio rerio (zebrafish): 568263
Entry
568263            CDS       T01004                                 
Symbol
snx17
Name
(RefSeq) sorting nexin-17
  KO
K17929  sorting nexin-17
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:dre04990]
    568263 (snx17)
Domain-containing proteins not elsewhere classified [BR:dre04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   568263 (snx17)
SSDB
Motif
Pfam: SNX17_FERM_C SNX17-27-31_F1_FERM SNX17-31_F2_FERM PX RA Ras_bdg_2 FERM_M MalQ_N
Other DBs
NCBI-GeneID: 568263
NCBI-ProteinID: NP_001038622
ZFIN: ZDB-GENE-030131-9475
Ensembl: ENSDARG00000091418
UniProt: Q5RID7 A0A0R4ITX6
Position
20:complement(19436186..19511646)
AA seq 472 aa
MHFSIPETEVRSDENGSSYVAYNIHVNGVLHCRVRYSQLLGLHEQIKKEYGNNVVPAFPP
KKIFTLTPAEVDQRREQLEKYMQAVRQDPILGSSEMFNSFLRKAQQETQQIPTEEVQLEI
YLSNGQKVKVNILTSDQTEDVLEAVASKLDLPDELVGYFSLFLVQERADGSCTYVRKLQE
FELPYVSITSLHSSDYRIILRKSYWDTAYDSDVMDDRVGLNLLYAQTVSDIDRGWILVNK
EQHRQLKSLQEKGSKKEFIRLAQTLKYYGYIKFDPCITDFPEKGCHVIVGAGNNELNFHV
KLPNEQMKEGSFKVTRMRCWRVTSSQVPVANGTANPSSSSKCDVKLELAFEYLMSKDRLQ
WVTITSQQAIMMSICLQSMVDELMVKKSGGSIKKMQKKRLNGSLQRSDSQQAVKSPPILD
SPDPNREQVVKLSTKLSSVSLRGLSSSNSAGDISGNDFHGNYAFEGIGDDDL
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgcatttctccattcctgagacggaggtccgctccgatgaaaacggatcttcgtatgtg
gcttacaatattcatgtgaatggcgtcttgcattgtcgagtacgatacagccaactcttg
ggccttcatgaacagataaaaaaagaatatggaaataacgtggtgcctgcttttccacca
aagaagatctttactctcacaccggctgaagtcgatcagagaagagaacagctggagaag
tacatgcaagctgtgcgtcaggaccccattctgggatccagtgagatgttcaacagcttt
ttgaggaaagctcaacaggagacccagcagatccccactgaagaggtgcagctggagatc
tacctgtccaacggccagaaggtcaaagtcaacatcctcacatctgaccagaccgaggac
gttctggaggcggtggcctcaaagcttgaccttcccgacgagctggtgggatatttcagc
ctgttcctggttcaggagagggctgacggcagctgcacgtacgtgagaaaactgcaggag
tttgagctgccctacgtgtccatcaccagcctgcacagttcagactatcgaatcatccta
cgaaagagctactgggacacggcgtacgacagtgatgtcatggatgatcgtgtgggactc
aacttattatacgctcagacggtgtcagacattgaccgaggatggatcctggtaaacaaa
gagcagcacagacagctgaaatccctgcaggagaagggctcaaagaaggagttcatcaga
ttggctcagacactgaagtactacggctatatcaagtttgatccctgcatcacagatttt
ccagagaagggctgtcatgttatagtcggagctggaaacaatgagctcaacttccacgtc
aagctgcccaacgagcagatgaaagagggcagcttcaaagtcacgcgcatgagatgctgg
cgggtcacgtcatctcaggtgccggtggccaacggtaccgcaaaccccagcagctccagt
aaatgtgatgtgaagcttgagctggccttcgagtacttgatgagcaaagaccgtctgcag
tgggtcaccatcaccagtcaacaggctatcatgatgagcatctgtctgcagtctatggta
gatgagctgatggtgaaaaaatctggcggaagcattaaaaagatgcagaagaagcgactg
aatggctcgttacagcgctctgacagtcagcaagctgtgaagtctcctccaatactggat
tctcccgatcccaaccgtgaacaagtagtcaaactttcgaccaagctgtcttctgtctcc
ctgagaggacttagttcttccaactcagcgggggacatcagtggcaatgactttcatgga
aactacgcctttgaaggaataggggacgatgacctgtga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (43)   

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