KEGG   Danio rerio (zebrafish): 568593
Entry
568593            CDS       T01004                                 
Symbol
sdc4
Name
(RefSeq) syndecan-4 precursor
  KO
K16338  syndecan 4
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04512  ECM-receptor interaction
dre04514  Cell adhesion molecules
dre04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    568593 (sdc4)
   04514 Cell adhesion molecules
    568593 (sdc4)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    568593 (sdc4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:dre00535]
    568593 (sdc4)
Proteoglycans [BR:dre00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   568593 (sdc4)
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 568593
NCBI-ProteinID: NP_001041614
ZFIN: ZDB-GENE-061111-1
Ensembl: ENSDARG00000059906
UniProt: Q0JY12
Position
6:complement(52664330..52675501)
AA seq 201 aa
MLVLSAAAAVFAESVRETETWVPLKNKAAIEDLESSGNSQNEDFEFTDLNQTDDEDGFDE
DDEDDYDDMSGSGFADVIDDIEDEFVNNQIPDDKGPFAPRPTVDENILVQNNEVFLRGAP
NQDLDNHSNVLMTHAGDDSLFNNTEVLAAVIAGGAVGLVFAILLIILLVHFVLRIKKKDE
GSYDLGKTPIYKKAPTTEIYA
NT seq 606 nt   +upstreamnt  +downstreamnt
atgttggttttgtcggcggctgctgctgttttcgctgaatcggtacgagaaactgaaact
tgggtacctctgaaaaacaaggcggccatcgaggacctggagtcctccggcaactcacag
aatgaagactttgagttcaccgacttaaaccagactgacgatgaggatggctttgatgaa
gatgatgaagacgattacgatgacatgtcaggctctgggtttgcagatgtgatcgatgat
attgaggatgaatttgtgaataaccagatccctgatgataagggtccatttgctccaagg
ccaactgtcgatgagaatattctggttcaaaacaatgaagttttcttgcgtggagcacca
aaccaagacttggacaatcacagcaatgtgctcatgactcacgctggagatgatagcttg
ttcaacaacacagaagtgcttgcagctgttattgcgggcggagcagttggcctggttttc
gccatcctcctcatcatcctcctcgttcacttcgttctccgcatcaagaagaaagacgaa
ggaagttacgacctgggaaagacgcccatctacaaaaaagctccaaccacagaaatctac
gcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (1)   
   Pfam (1)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system