KEGG   Danio rerio (zebrafish): 568750
Entry
568750            CDS       T01004                                 
Symbol
trim108
Name
(RefSeq) tripartite motif containing 108
Organism
dre  Danio rerio (zebrafish)
SSDB
Motif
Pfam: zf-B_box zf-RING_UBOX zf-C3HC4 zf-C3HC4_4 zf-C3HC4_2 zf-RING_6 zf-RING_5 zf-C3HC4_3 SPRY zf-RING_2 zf-RING_10 AAA_13 DUF4449 Prok-RING_4 BshC QSregVF_b Glyco_hydro_109_C zf-Nse DUF1043 Peptidase_M41 zf-RING_11 zf-RING_4 Exonuc_VII_L
Other DBs
NCBI-GeneID: 568750
NCBI-ProteinID: NP_001038633
ZFIN: ZDB-GENE-060503-670
Ensembl: ENSDARG00000061762
UniProt: Q1LXQ6
Position
16:21800879..21805953
AA seq 494 aa
MHSPLSLEIKCSVCLSDFTDPVTLSCEHSFCRQCITGHMQASLGPSACPECQKPYNEKDL
KASRLLRNMTSTVRGHLAEQKSDRSTPQEGTQTLKLADMEKMLMCSEHDEKLKLFCETDQ
KLVCVICRDGDKHKGHVFKPVKEAAEINKGKLKTALGFLAKENGQLDYMIQQQTSEITKT
EDKSKTLSAQISDHFEELHQILRQIEDEVKKLLEKEEKKVTEALQTNQSVINQRFMENKE
KEIILQSALEIDQPDHFLQWWNEKGFPMTNNMKQKAGVKPSNTQYMSRVKDLTVLPDSLF
LGPHETHLQFFVWKQMLGSIKPVPESLTLKNPGESYLKVSPGGTRIRQADRATGLYKDFN
PGTVSVENFQSGQHYWEVEVGEKPDWTVGIKMGTDKQRSDILLHLKHHKGYVLSCDGKDS
PLSIRDRPQKIGLYLDCERKQVLFYNADNMTRLVQKNYSSKQPCCVSLVPGVYLDGKNSD
PLTVCSYEFNTGKR
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgcattcccctttgtctttggaaatcaagtgctccgtgtgtctgagtgattttacggat
ccggtgactctctcttgtgagcattcgttctgtcgtcaatgcattactggccatatgcag
gccagcctgggaccaagtgcctgtccagaatgccaaaaaccttacaacgaaaaagacctg
aaagccagccgtttactgagaaacatgacctcgacagtacgtgggcaccttgcagagcag
aaatcagacagatccacacctcaagaaggaacgcaaacattgaagcttgcagatatggag
aagatgctgatgtgttctgaacacgacgagaagctcaaactgttctgtgagactgatcag
aagctggtgtgtgtcatctgcagggatggagacaaacataaaggacacgtctttaaacca
gtgaaagaagctgcagagataaacaaggggaagctaaagactgctttgggttttcttgcc
aaagaaaatggacaactggattacatgatacaacaacagacctcagagatcaccaaaact
gaggataaatccaaaaccttatcagcccaaatctctgatcattttgaagaactgcaccag
atcttacgacaaatagaggatgaggtgaaaaaactgttagagaaggaggagaagaaagtt
acagaagccttgcagactaatcagtctgtgataaatcaaaggttcatggagaacaaagag
aaggagattattctgcagtcagctttggagattgatcaacccgatcactttctacagtgg
tggaatgaaaaaggatttccgatgacaaataacatgaagcaaaaagctggtgtgaagcca
tcaaatacccagtatatgtcaagagtgaaagatctcacagttcttcctgactccctcttt
cttggtcctcatgaaactcacctgcagttctttgtgtggaagcagatgctgggatccatc
aaaccagttcctgagagtttaaccctgaaaaatcctggagagtcatatttaaaagtgtct
ccagggggcaccagaatccggcaagctgacagagcgactggtctgtataaagacttcaac
ccaggtacagtttcagtggagaactttcagtctggtcagcactactgggaggtagaggtc
ggagaaaagccagactggaccgtgggaatcaagatgggcactgacaaacagcggagtgac
atcctgctccatcttaaacaccataaaggctacgttctttcctgtgatggaaaagactct
ccattaagcattcgagacagacctcagaaaattggcttgtatctggactgtgagagaaag
caggtgctgttctataatgctgacaacatgactcggctggtgcagaaaaactacagctct
aagcagccttgctgtgttagtctggtgccaggagtgtatctggatggtaaaaacagcgac
ccgctcactgtctgctcatatgagttcaacactgggaaacgttaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (23)   
   Pfam (23)   
All databases (46)   

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