KEGG   Danio rerio (zebrafish): 568986
Entry
568986            CDS       T01004                                 
Symbol
bbs1
Name
(RefSeq) Bardet-Biedl syndrome 1 protein
  KO
K16746  Bardet-Biedl syndrome 1 protein
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:dre03037]
    568986 (bbs1)
Cilium and associated proteins [BR:dre03037]
 Primary cilia and associated proteins
  BBSome
   568986 (bbs1)
SSDB
Motif
Pfam: BBS1 PHTB1_N
Other DBs
NCBI-GeneID: 568986
NCBI-ProteinID: NP_001091721
ZFIN: ZDB-GENE-060126-1
Ensembl: ENSDARG00000075169
UniProt: A4QP86
Position
21:27464536..27481382
AA seq 588 aa
MSSVPQELKDTSVASSKWLDAHYDPVANLYTFSSCIALSDLHGDGENKLVVGDLGTGLCN
MKLKVYRGTGLLSESTLLDLPTGLVSFLMDLHEPRTPAIAVASGPFIYVYKNMRPYFKFT
LPSLDINPLEQDVWCQAKEDMIDPMTLKEMLEGLRDKSEIPLSVRSLRFLMLEPHEMENF
VHLHKELPIRRQTVITCIGTLKKNMADEDAVSCLVIGTENGDVYILDPEAFTILYKMSLP
STPTLMDVTGQFDVEFRITVACRNGNIYILRRDSPKPKYCIELSSHPVGLVRMGKNVVVG
CTHETLHGYTQKGKKLWTAYLPAPVTTMALMDLPTRGFQAVLVGLANCEVHMYRDKNLIG
TIKTPDVVTSICFGRYGREDGTLIMTTKGGGLIVKILKRTAVFDDRDSTPGPPIAQSIRL
NVPKKTKLYVDQTLRERENAIAMHRAFQMDLSRLRLAAARAYVKALESSLTPMSASLTEP
LKMNAVVQGLGPSFKLTLNIQNTAASRPVMNLAISFLYDESLYSMRTAFFKIPLLVPGLN
YPIDTFVECLSDKGVSDIIKVFVLREGKSAPLLTAHINMPVSEGLALN
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgtcatctgttccccaggagttgaaagacacttcggtggcaagctccaaatggctcgat
gcccactatgacccagttgccaacctgtacaccttctcctcatgcattgctctttcagat
ttgcatggcgatggtgaaaataagctggtagtgggtgatcttggcacaggcttgtgtaac
atgaagctgaaggtgtatcgtggcaccggtctgctgagtgagagcaccctgctggacttg
cccaccggcctggtctccttcctcatggacctgcacgagccgagaacaccggccatcgct
gtggcctcgggtcccttcatctacgtctacaagaacatgagaccctacttcaaatttacg
ctccctagcctggatataaaccctcttgagcaggacgtctggtgtcaggccaaggaggac
atgattgatccaatgacccttaaagagatgttagaaggattaagggacaaatcagaaatt
ccactgtctgtcagatcactacggtttctcatgctcgagccacatgaaatggagaatttt
gttcatcttcacaaagaactgcctatacgtagacagacggtcattacctgtattggaaca
ttaaagaagaacatggcggatgaggatgcagtcagttgcctagtgattgggacagagaat
ggggatgtttacatattggatccagaagcctttaccattctctacaagatgtcactgcct
agtacgcccactcttatggacgtgacaggtcagtttgatgtggagtttcgtatcactgtg
gcctgtcggaatggcaacatatacatactacgcagggattccccaaagcccaagtactgc
attgagctgtcctctcacccagtgggactggttagaatgggaaagaatgtggttgtagga
tgtactcatgagacactgcatggttacactcaaaaggggaaaaagctgtggacagcttat
ttgccagcccctgttaccaccatggcactgatggatctccccacacggggattccaggct
gtgctggttggtctggccaactgtgaagtacacatgtacagagacaaaaaccttatcggc
actatcaagactccggatgtagtgacaagcatttgttttggtcgctatggacgggaagac
ggcactctgataatgaccactaaaggaggaggtttgattgtgaagatcctaaagaggaca
gctgtgtttgatgacagggactcgacccctggacccccaatagcccagagcatccgtcta
aatgtgcccaagaagaccaagctctatgtggaccagactctgagagagcgtgaaaatgct
attgccatgcaccgggcatttcagatggacctgagcaggctgcgtttagctgcagcacgg
gcctatgtcaaagccctggagtccagcctcacaccaatgtccgccagcctgactgagcca
ctcaagatgaacgctgtggttcaagggctgggtccatctttcaagctcactctgaatatc
cagaacactgctgcgtcccgtcctgttatgaacctagccatcagttttctgtatgatgaa
agtttgtacagcatgagaacggctttctttaagatccccctgctggttccagggctaaat
taccctattgacacttttgtggagtgcttgagcgacaaaggcgtctcggacattatcaaa
gtgtttgtgctgagggaaggaaagagtgcccctctcctcaccgcccacatcaatatgccc
gtgagtgaaggactagcactgaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

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