KEGG   Danio rerio (zebrafish): 570531
Entry
570531            CDS       T01004                                 
Symbol
brd4
Name
(RefSeq) bromodomain-containing protein 4
  KO
K11722  bromodomain-containing protein 4
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:dre01001]
    570531 (brd4)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dre03021]
    570531 (brd4)
   03036 Chromosome and associated proteins [BR:dre03036]
    570531 (brd4)
Protein kinases [BR:dre01001]
 Serine/threonine kinases: Other
  BRD family [OT]
   570531 (brd4)
Transcription machinery [BR:dre03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Brd4/P-TEFb complex
     570531 (brd4)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    570531 (brd4)
SSDB
Motif
Pfam: Bromodomain BET BRD4_CDT
Other DBs
NCBI-GeneID: 570531
NCBI-ProteinID: NP_001104751
ZFIN: ZDB-GENE-030131-267
Ensembl: ENSDARG00000078904
UniProt: F1R5H6
Position
3:53116172..53223643
AA seq 1444 aa
MGDGLDAVQMSGSSSSQGQPSSQAPSSFNPNPPETSNPTRPKRQTNQLQYLLKVVLKSLW
KHQFAWPFHAPVDAVKLNLPDYYKIIKNPMDMGTIKKRLESAFYTSAQECIQDFNTMFTN
CYIYNKPGDDIVLMAEALEKVFLTKISEMPQQEVEISTTAGKGRGRGRRDPDMNMKVGPV
LEPLTASPQTRGLSNLTPGPQTRGPPQGPPTLPPQPIVQIQALPPRVPPSLPTIPLHAPQ
LGPPFSLGPTDCNPPAPIITAVPPPTQTALPPVHIQQSAAPPILQTPISIPNKRKSQKRK
ADTTTPTANDQLNESSPAESKSGKTLPRRDNTRPSKLPKKEAPDSQHHWTAAPGTPSPKQ
QEQLRYCSGIVKDMFAKKHAAYAWPFYKPVDVDTLGLHDYHDIIKHPMDLSTIKDKLETR
QYREAQEFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEMLAPAPA
PVLHPAPVKTQPVMATASSSDTSSDSSSESESSTDDSEEERAQRLAELQEQLKAVHEQLA
ALSQPQASKPKKKEKEKKEKKKDKHKKKAGVMPALEEILEPPPALKPQGKPKNKDPLPKK
SKKLSKKEGGKSNRSMAPPGAAPPTLQPVPGLDTEEDLGLTGGAAMAGMAAGEKCKPMSY
EEKRQLSLDINKLPGDKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVS
SCLRKKKKPAVPEKSMEAISAVKTKGTSSDSGSSSESSSSESEDSETGMASKPKKRGRGE
GKKAHHQTTAPGMPLPQVPLQPQTPALQPSIQLKQQQPQHPSPAAYMPPPVTALEPSQLL
ENPFDPLAHFMHLPHHANDSSSPAPPHLNAHPPGGPVSPETHPFLNQHPILPSPALHNAL
PQQPSRPSNRAAPLPPKPLQQSTSQQQPPPQQTLVPPQQLQPQQQQPAPPQQQHLPHHPL
HAPQQMRPRPLSPPTLTPQGLLSSQPPQMLLEDDEEPVPSMSLPMYLQHLQPNRLQATPT
SLMQSLQSRPQPPGQPSLLQSVQVQSHLPPPQLPVQTQVQPQQPAPHQPSPQLSQHQARH
MQQLGFPQGPLQTAQTQPGQHKVSMPSTKAQQIIQQQQATQHHSPRQHKADSYNSAHLRD
NPSPLMMHSPQIPQYSLVHQSPSQDKKEPQRGPSALGGIKEEKLPPSPVMRGEPFSPAMR
PESHKHPDSKPTMPGHSQQRADMKPLEMSRPVIRSSEQSGPPPSMQDKEKFKQEPKTPSA
PKKVQDVKFKNMGSWASLAQKSSTTPSSGLKSSSDSFEQFRRAAREKEEREKALKAQVEQ
AEKDRLRKEQEKLRGRDEEDSIEPPRRPLEEPRRRQEPQQVQPPPQQHQTQAQAQTLNPA
QSPSASQPTQAPPQSPASSQSALDQQREMARRREQERRRREAMAATIDMNFQSDLMAIFE
ENLF
NT seq 4335 nt   +upstreamnt  +downstreamnt
atgggggacggcctggacgcagttcagatgtcggggagcagcagcagtcaggggcagccc
tcgtcccaggccccttcttccttcaacccgaatcccccagaaacctccaaccccacccgg
cccaagcgccagaccaaccagctgcagtacctgctgaaggtggtgctgaagagtctttgg
aagcaccagttcgcttggccttttcatgctcctgtcgacgccgttaagctaaatctgcct
gactattacaagataatcaaaaaccctatggacatgggaacaatcaagaaacgcctagag
agcgcattctacaccagtgcccaagaatgtattcaagacttcaacaccatgtttaccaac
tgctacatttacaataagcctggggatgacatagtcttaatggccgaagcactggagaag
gtgttccttaccaagatttcagagatgccccagcaggaggttgaaatatccaccacggcc
ggcaaaggtcgtggccggggcaggagggatccagacatgaacatgaaggtcggacctgtt
ctggagcctttgactgcaagccctcaaacacgtggcctttctaatcttaccccagggcca
caaactagaggaccaccacagggtccacctactttacctccccagcctatagtgcaaatt
caagccttgccccctcgagtgcccccttcgcttcccacaatccctctccacgcgcctcaa
ttagggccgcctttttcgttgggccccactgactgcaacccaccggcccccatcataacg
gctgtgcctccccccactcaaaccgccctgccacctgtgcacattcaacagagcgctgct
ccacctattctacaaactcccatctcaatacctaacaaaagaaaaagtcagaaaaggaaa
gcagacacaacgacacctacggcaaacgaccagctgaacgagtcctcacccgccgagtca
aagtcaggcaagactcttccacgccgggataatacacgaccaagcaaattacccaaaaag
gaggcaccggactcccagcaccattggacagccgcccctggaacccctagccccaaacag
caagagcagttacgctattgctcgggcatcgtaaaggacatgtttgctaagaaacacgca
gcgtacgcctggcccttctacaagccagtggacgtggacactttagggctgcacgactac
catgacatcatcaaacaccccatggacctcagcacgattaaggataagttggaaaccaga
cagtacagagaagctcaggagtttgcagcagatgtacggttaatgttctccaactgctac
aagtacaaccctccagaccatgaagtggtggctatggcacgcaaactacaggatgtgttt
gagatgcgttttgctaaaatgcctgatgaaccagaagaaatgctggcccctgctcctgcg
ccagtgctccatccggcacctgtaaagacacagccggtcatggccactgcctcatcctcg
gacacctccagcgattcgtcatcggaatccgagtcctccacggacgattctgaagaggaa
agagcccagaggctagcagagcttcaggagcagttgaaagcggttcatgagcagctggct
gccttgtcccagcctcaggccagcaaaccaaagaagaaggaaaaggaaaagaaggagaag
aagaaagacaagcacaaaaagaaagcaggagtcatgccggcactggaagagatcctggag
ccgcctcctgccctcaagcctcaaggaaagcccaagaacaaggatcctctgcctaagaag
tctaagaagcttagcaagaaggagggaggaaagagcaaccgctccatggctcctccaggt
gccgccccaccaactctgcagcctgtgccaggtctggatactgaagaggatctgggtctt
actggaggggctgcgatggcaggcatggccgcgggggagaagtgtaaacccatgtcctat
gaagagaagagacagctgagtctggacattaacaagctgcctggagacaagctgggccga
gtggttcatatcattcagtcccgcgagccttcactcaagaactccaacccggacgagatt
gagatcgacttcgagacgttaaaaccttcaacgctgcgggagctggagagatacgtgtcg
tcctgtcttcgcaagaagaagaaaccagccgttccggagaagtccatggaggcgataagt
gctgtcaagacaaaaggcacttcctccgattcaggcagcagcagtgagtccagctcctca
gaaagtgaagactctgagacagggatggcttctaagccaaagaagagagggagaggtgaa
ggaaagaaggctcatcaccagaccacggctccaggcatgcctctgccgcaggtccccctt
caaccccagacccctgctctgcaacccagcattcagctgaagcagcagcagccgcagcat
ccctctccagctgcttacatgccacctcccgtcacggctctggagccctcgcagctcctg
gaaaacccctttgaccctctggctcacttcatgcaccttccccaccacgcaaacgactcg
tcctctcctgctccacctcacctcaacgctcaccctccaggaggcccagtgtcacctgag
acgcatccgttcctcaaccagcaccccatccttccatccccagccctgcacaacgctttg
ccccaacagccttcacggcccagtaacagggcagccccactacctcctaaacctctgcag
caaagcacgtcccaacagcagccaccaccccagcagaccctggtgcccccacagcagctt
cagccgcagcagcagcagcctgctccaccccagcagcagcacctccctcatcacccgcta
cacgccccacagcagatgcgcccaaggccgctatcccctcctacgctcacaccccaaggc
ctgctctcctctcagccccctcagatgctgctggaggatgacgaggagcctgtgccctcc
atgtccctgcccatgtacttgcagcacctacagcccaaccgactacaggcaacgccgaca
tcactgatgcagtcgctgcagagcaggcctcagccgccaggacagccgtctctgctgcag
tcggtgcaggttcaatctcacttgccccctccgcagcttcccgttcagactcaagtgcag
ccgcagcagccagcgccacaccagccctcgccacagctctcacagcaccaggccagacac
atgcagcagctcggcttccctcaaggcccgctgcagaccgcacagacgcagcccggtcaa
cacaaagtgtccatgccctccacaaaagcacagcagatcatccagcagcagcaggccacg
cagcatcactcgccacgccaacacaaagctgactcctacaactccgcacacctgcgagat
aacccctccccgctcatgatgcattcccctcagatcccccagtattctttagtccaccag
tccccctctcaggacaaaaaggaaccacagcgaggtccttcagctttgggtggcattaaa
gaagaaaagctgcccccgtcacctgtgatgcgcggtgagcccttcagtccggccatgaga
ccagagtctcataaacatcccgacagcaaacctacaatgccgggccacagccaacagaga
gcagatatgaaaccacttgaaatgtcccgtcctgtgatccgctcgtctgaacagagcggc
ccgcctccttccatgcaggacaaagagaagtttaaacaggagcccaagacgccctcggct
cctaaaaaggtacaggatgtgaaatttaagaacatgggttcctgggcgagcctggcacag
aaatcctccaccactccctcgtccggtctgaagtcctccagtgacagcttcgagcagttt
cggcgtgctgcccgagagaaggaagagcgagagaaagccctcaaggcccaagtcgagcaa
gctgagaaagaccggctgcgtaaagaacaggagaaacttcggggtcgagatgaggaggac
tcgattgagccgcctcgacggcctctggaggagccccgcaggcggcaggagccccagcag
gtccagccgccaccacagcagcaccaaactcaagcccaagcccaaaccctaaacccggca
cagtcaccctcggcctcgcagccgacacaagccccaccacagtcgcccgcctcgtcccag
agtgcacttgaccagcagagggagatggcacgtcgccgagagcaggagcggagaaggaga
gaggcgatggcagctactatcgacatgaatttccaaagcgatttgatggcgatctttgag
gagaacttgttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (100)   
   KEGG ORTHOLOGY (1)   
   RefGene (94)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (114)   

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