KEGG   Danio rerio (zebrafish): 571904
Entry
571904            CDS       T01004                                 
Symbol
gpc6a
Name
(RefSeq) glypican-6a precursor
  KO
K08112  glypican 6
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:dre00535]
    571904 (gpc6a)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:dre00537]
    571904 (gpc6a)
Proteoglycans [BR:dre00535]
 Cell surface proteoglycans
  Glypican family (GPI-anchored HSPG)
   571904 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:dre00537]
 Others
  571904 (gpc6a)
SSDB
Motif
Pfam: Glypican MRP-S23
Other DBs
NCBI-GeneID: 571904
NCBI-ProteinID: NP_001103189
ZFIN: ZDB-GENE-071004-15
Ensembl: ENSDARG00000103156
UniProt: A7MBT1
Position
1:2712901..3036374
AA seq 562 aa
MVKTPVVVFTSLSLLLSLSCAGDVKSRSCSDVRLAFTTKGFSLHNVPHQEISGEHLRVCA
QGYTCCTSDMEDQLGQQSKLDFERLVDDSSRNIRTTFTSRHKKFDEFFLELLDNSEKSLN
DMFVRTYGKLYTHNSEMFEDLFSELKRYYTGGNVNLEEVLNDFWSRLLERMFQLLNSQFT
FSDDYLECISKYTDQLKPFGDVPRKLKAQVTKAFIAARSFVQGLMVGREVANRVAKVNIS
PGCSKALTKMWYCPYCGGMSGLKPCANYCQNVMRGCLANQADLDPEWNLFIDAMLLVADR
LEGPFNIEAVMEPIDVKISEAIMTMQDNSMQVSSKVFQGCGHPKAASVGRSARGISDVFN
SRFKPFNSPEERPTTAAGTSLDRLRIVWRTMQHSVVDIKEKLKESRRFWSSLPDSICAED
EMTDPDEEQCWNSHTRGRYFPEVVKDGLTNQLNNPEVEVDITRPDTFIRQQIMTLRVMTN
KLRNAYNGKDVYFQDSSDEESGSGSGSGFTTEPEVVHTEPPMLEADKSDPQPPTDAGSVQ
QKPSVTVLSIPALLLLLLLCWR
NT seq 1689 nt   +upstreamnt  +downstreamnt
atggtgaagacacctgtcgtggtttttacttctttatcgcttctgctgtcgctgtcatgt
gctggagatgtaaaatcgcgcagctgcagcgatgtgcgcctggcgttcaccaccaaaggc
ttcagtctccataatgtgccacatcaggagatatcaggtgagcatctgcgggtctgtgct
caaggatacacctgctgtacttcagacatggaggatcagctcggacagcagagcaagctg
gacttcgagaggctggtggacgacagcagcaggaacatacgcacaacattcacctccaga
cacaaaaagtttgacgagtttttcctggagttgctggacaactcggagaagtctctaaac
gacatgtttgtgcgcacatatggcaaactctacacacacaactcggagatgttcgaggac
ctgttctcagagctgaagcgctactacaccggcgggaacgtcaacctggaggaggtgctg
aatgacttctggtcgcgtctgctggagagaatgttccagctgctcaactcgcagttcacc
ttcagcgacgactatctggagtgcatcagcaaatacaccgaccagctcaagccgttcgga
gacgtgccgcgaaaactcaaggcgcaggtcaccaaagctttcatcgcggccagatccttc
gtccagggacttatggtgggccgagaagtggccaacagggtggccaaggtcaatatttct
ccaggctgcagtaaagcattgactaaaatgtggtactgcccgtattgtggaggaatgtca
ggactcaaaccctgcgccaactactgccagaatgtgatgcgcggctgcctggccaaccaa
gcggatctggaccctgagtggaacctctttattgatgccatgttgctggtggctgacaga
ctggaagggccctttaacattgaggccgtcatggagcccatcgatgtcaagatctctgaa
gccatcatgaccatgcaggacaacagcatgcaggtttcatccaaggtgtttcaaggatgt
ggtcatcccaaagcagccagtgtaggccgatctgcccgcgggatctcggatgtgttcaac
agccgcttcaaacccttcaacagcccagaagaacgacccaccacggcagcgggcaccagc
ctggacagactgaggattgtctggaggacgatgcaacacagcgtggtcgacattaaggag
aagctgaaggagtcgaggaggttctggtcgtctctgcctgacagcatctgtgctgaggac
gagatgactgacccagatgaggagcagtgctggaacagtcataccaggggaagatatttc
ccagaagtggtaaaagacggtcttacaaaccagctgaataacccagaggtggaggtggac
atcacaagaccagacactttcatccgacagcagatcatgaccctcagagtaatgaccaac
aagctgagaaacgcatacaacggcaaagacgtctactttcaagactccagtgatgaggag
agcggttctggcagtggcagtggcttcaccacagaacctgaagtggttcacacagaaccg
ccgatgctggaagccgacaaaagtgacccacagccgccgacagacgctggatctgtgcag
cagaaaccctcagtgactgtactgagcatccctgcactgctgctgctgctgctgctctgc
tggagataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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