KEGG   Danio rerio (zebrafish): 573110
Entry
573110            CDS       T01004                                 
Symbol
cbx4
Name
(RefSeq) E3 SUMO-protein ligase CBX4
  KO
K11452  E3 SUMO-protein ligase CBX4 [EC:2.3.2.-]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    573110 (cbx4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dre04121]
    573110 (cbx4)
   03036 Chromosome and associated proteins [BR:dre03036]
    573110 (cbx4)
Ubiquitin system [BR:dre04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   573110 (cbx4)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     573110 (cbx4)
SSDB
Motif
Pfam: Chromo CBX7_C
Other DBs
NCBI-GeneID: 573110
NCBI-ProteinID: NP_991312
ZFIN: ZDB-GENE-040329-2
Ensembl: ENSDARG00000099441
UniProt: Q804D1
Position
3:18556098..18562964
AA seq 477 aa
MELPAVGEHVFAVEGIEKKRLRKGRMEYLVKWRGWSPKYNTWEPEENILDPRLLVAFQNR
ERQEQMVGYRKRGPKPKHPLIQLPAFARRSSILGGLQDTSLDEENQPKVDSLQMHRSRPQ
HYQLNSKKHHQYQPSCKEISVEQHMSGKKKHFYQLNSKKHHHYQPDPKMYDTPLTGPKEV
KGQDPSNKGWNLPPALQQKWIRNKDTGCLSKVKDLSIELKGLPDNANKAERTLKTSAKEF
ALPNGISSKMKIIKNKNKNGRIVIVMSKYMDKGVHSSKVKNRDVSQVGTVHNEEPPVNGT
DNRSDGETPDQGEGRENGSIEKPSEYVDEKSLRKDMPGQKATEICDRPNSSPAKVDAKSN
HLKRHLSEPSEDVRNCKQLLSFRSISAPNSSPQREPINLHYKSSPVDNYDFSDSIPEEPI
DLSAKTLKRFTALDKVSGSSAQMDKTDSQCKAFVGNVIITDITTNCLTVTFKEYVQE
NT seq 1434 nt   +upstreamnt  +downstreamnt
atggagctgcctgccgtcggggagcatgtcttcgcggtggagggcatcgagaagaagcgc
ctacggaagggtagaatggagtatctggtgaagtggagaggatggtcacccaaatataac
acatgggaaccggaggaaaacattcttgacccgcgccttcttgtcgctttccaaaacaga
gaaaggcaggagcaaatggtgggatatcgaaaaagagggcctaaacccaaacacccactg
atccagcttcccgcatttgctcgtagatcaagcatcctgggtggtcttcaggacacatca
ttggatgaggaaaaccagcccaaggtggattccctccagatgcaccgctcacggccgcag
cactaccagctgaacagtaaaaaacaccaccagtaccagccaagctgcaaggagatctcc
gtcgagcagcatatgagcgggaaaaagaaacacttctaccagctgaacagcaagaaacat
catcactaccagccggaccccaagatgtacgacacgccactcacggggcccaaagaggtc
aagggtcaagacccttccaacaaaggctggaacctccctccagccctacaacagaagtgg
attcgcaacaaagacaccggctgcctgagtaaagtgaaagatctgtctatcgagctcaag
ggtttgccggataatgctaacaaagcagagcggacactcaagacgagtgccaaagagttt
gcacttcctaatggcatcagcagcaagatgaaaataatcaagaacaaaaacaaaaacggc
cgaattgtcattgtaatgagcaaatacatggacaaaggtgtgcattcatccaaagtaaag
aacagggatgtttctcaagtgggaacggtacacaatgaggaacctccagtgaatggtacg
gacaatcggtctgatggtgaaacaccagatcaaggagaaggccgtgagaatggttctatt
gagaaacccagtgaatatgttgatgaaaagtctctcagaaaggatatgcctggacaaaaa
gccacagaaatatgcgaccgaccaaactcttcgccagcgaaggtagacgccaaatcaaat
caccttaagaggcatctttcagagcccagcgaggacgtgagaaactgtaagcagctcctg
agcttcaggagcatcagtgcgccaaactcttcccctcagagagaacctataaacctgcat
tacaaaagcagccctgtggataattacgactttagcgactctattcccgaagagcctatt
gatttgagcgccaaaactctaaaacggttcactgctttggacaaagtttcaggaagctca
gcacaaatggacaaaacagacagccaatgtaaagccttcgtgggaaacgttatcatcact
gatatcaccacgaactgcttgaccgttacctttaaagaatacgttcaagaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (1)   
   GenBank (6)   
   EMBL (6)   
Protein domain (2)   
   Pfam (2)   
All databases (40)   

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