KEGG   Danio rerio (zebrafish): 573145
Entry
573145            CDS       T01004                                 
Symbol
khsrp
Name
(RefSeq) far upstream element-binding protein 2
  KO
K13210  far upstream element-binding protein
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    573145 (khsrp)
   03041 Spliceosome [BR:dre03041]
    573145 (khsrp)
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     573145 (khsrp)
Spliceosome [BR:dre03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    573145 (khsrp)
SSDB
Motif
Pfam: KH_1 KH_2 KhpA-B_KH DUF1897
Other DBs
NCBI-GeneID: 573145
NCBI-ProteinID: NP_001082897
ZFIN: ZDB-GENE-030131-4357
Ensembl: ENSDARG00000026489
UniProt: A4QP88
Position
1:complement(54960189..54972236)
AA seq 666 aa
MSEYSAVPPPGPGAALGAGGLKKDAFADAVQRARQIAAKIGGDVTGPPMSNNGGAESYPF
PTPKRSLEDGDQPESKKMASDRDNAAALSIGAQLAALSKQSVRPSSMTEEYRVPDGMVGL
IIGRGGEQINKIQQDSGCKVQIAPDSGGLPDRSVSITGGPEAIQKAKMMLDDIVSRGRGT
PPSFHESTNGSGHMQEMVIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDASQGPNMDK
PLRIIGDPYKVQQAREMVQEILRERDHPGFERNEYGSRMGGGGGGGGGGGGGGGGIEVPV
PRHSVGVVIGRSGEMIKKIQNDAGVRIQFKPDDGTGPDKIAHIMGPPDRCEHAASIINEL
LQSIRVREEGGGGPPGPPGTGMPPGGRGRGRGPGGNWGGPPGSEMTFSIPAHKCGLVIGR
GGENVKAINQQTGAFVEISRQPPPNGDPNFKLFTIRGSPQQIDHAKQLIEDKIEGPLCPV
GPGPGGPGPAGPMGPYNPNPYQPGPPGGPPHGGPPGGQYPQGWGNAYQQWQPHDPSKAAT
DPNAAWAAYYAQYYQQPGGAAMPGQTPAAQPAAPGPADQSQAAPGAAQPDYTKAWEEYYK
KMAAAGGGAAPAAAGGAQPAGAAAAAGQTDYSAAWAEYYRQQAAYYGQTGQTPGQPGATP
QGQQAQ
NT seq 2001 nt   +upstreamnt  +downstreamnt
atgtctgagtacagcgcggtgccgccgcccgggcccggggcggctttaggagccggtggg
ctgaaaaaagacgcgttcgcggacgcggtacagcgcgcgcggcagattgcagcaaagatc
ggtggtgacgttacaggtcccccaatgagcaataacggcggagcggagagttatcccttc
ccgacgccgaagcgatcgctggaggatggagatcagcctgaaagcaagaagatggcgtct
gacagggacaacgctgcagctctatctatcggagcccagctggctgccctttccaagcag
agtgttcgtccttcgtcgatgacagaagagtacagagtccctgatggcatggttggcctc
atcattggtcgaggtggcgagcagatcaataagatccagcaggactctggttgtaaagtt
cagatcgctccagacagtggcggtcttccagacagaagtgtgtccatcacaggaggccct
gaagccatccagaaggccaaaatgatgctggacgacatcgtctctcgggggcggggcact
ccgccttcctttcatgagtcgaccaatgggagtggccacatgcaggaaatggtcattcca
gcagggaaggctggtctcattattggcaaaggaggagagaccattaaacagctgcaggag
cgagctggtgtgaagatgattttgatccaggacgcttctcaggggccaaacatggacaaa
ccactgcgcattattggagacccttacaaagtccagcaagcccgtgagatggtgcaggag
attctgcgagagcgggatcatccgggcttcgagaggaatgagtatggctctcgaatgggt
ggtggaggaggtggaggcggcggtggtggaggtggcggcggtggaattgaggttccagtt
ccacgtcactctgtgggtgtcgtgattggccgaagcggagagatgatcaagaagattcag
aatgacgccggcgtgaggatacagttcaaaccagatgacggtactggtccagataagatc
gctcatataatgggtcctcccgaccgctgtgaacacgccgccagtatcatcaatgagctt
ctgcagagcatcagagtacgagaggaaggaggagggggtccgcctggtcctcctggcaca
gggatgcctccgggtgggcgtggcagagggcgtggtcctggtggaaactggggtggtccg
cctggcagtgagatgaccttttcaattcctgcccacaaatgcggcctcgttattggcaga
ggtggtgaaaacgtgaaggccatcaatcagcaaacaggtgcatttgtggagatctcacgc
caaccaccgcccaacggagaccccaacttcaaactgttcaccatccgggggtctccacag
cagatcgaccacgccaaacagctgatcgaggacaagattgagggtcccctctgccctgtt
ggtcccggacccggtggaccaggccctgctggacccatgggcccctacaacccaaacccg
taccagcccggaccccctggtggaccgccacatggtggtcctcctggtggtcagtatcct
cagggttggggaaatgcataccagcagtggcagccacatgatcccagtaaagcagccaca
gatccaaacgcagcgtgggcggcttattacgctcagtactaccagcagccaggaggggca
gctatgcctggacagacgcctgcagctcagccggctgctcccggtcctgctgaccagagc
caagctgctccaggagcggcccagcccgactacaccaaggcctgggaggagtattacaaa
aagatggctgcagcaggtggaggtgctgcacccgccgctgcaggaggagctcagcctgca
ggagctgcagcggcagcaggacagacagactacagcgccgcatgggccgaatactacaga
cagcaggctgcttattacggacagacaggacagaccccgggtcagccaggggcaacaccg
cagggccagcaggcgcagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (51)   

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