KEGG   Danio rerio (zebrafish): 58027
Entry
58027             CDS       T01004                                 
Symbol
spon1a
Name
(RefSeq) spondin-1a precursor
  KO
K24427  spondin-1
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:dre04990]
    58027 (spon1a)
Domain-containing proteins not elsewhere classified [BR:dre04990]
 Thrombospondin domain-containing proteins
  F-spondins
   58027 (spon1a)
SSDB
Motif
Pfam: TSP_1 TSP1_spondin Spond_N Reeler TSP1_CCN TSP1_ADAMTS
Other DBs
NCBI-GeneID: 58027
NCBI-ProteinID: NP_571590
ZFIN: ZDB-GENE-000427-9
Ensembl: ENSDARG00000010029
UniProt: O42113
Position
18:28564640..28880191
AA seq 808 aa
MKVKRSEMWRAGVLLLFTGCVCASVPEEPADRTSPSDGYCSWITRAQPHGAGGRRESTSE
FRLRVEGDPEHYQPGSTYRVTLYATNPAYFRGFTLIALKEGHNGDQEEDYAGNFQIIDEE
DTQFMTSCPPAVTESTPRRRTRIQVFWTAPPSGHGCVLLKASIVQRKIISFQDEGSLTKR
MCEKESLYGETTDKPLLDCCACGTAKYRVTFYGNWSEKLHPKDYPRRANHWSALIGASHS
KNYILWEYGGYASEGVKQVAELGSPVKMEEEIRQKGDEVLTVIKMKAQWPAWQPLNVRAA
PSAEFSVDRTRHLMSFLTMLGPSPDWNVGLSSEDLCTRECGWVQKVVQDLIPWDAGTDSG
VSYESPNKSTAPQEKIRPLTSLDHPQSPFYDPEGGAITPVARLVVERIARKGEQCNIVPD
NVDDIVADIAQEEKEEDDTPETCIYSNWSPWSACSSSTCEKGKRMRQRMLKAQLDLSVPC
PHTQDFEPCIGPGCSDEDSSTCMMSEWITWSPCSVSCGSGLRSRERYVKQFPDDGFACTH
PTEETEPCTVNEECSSSSCLVTEWGEWDACSATCGLGMKRRERMVKMPPSDGSICGAEVV
EVEKCMMPECHTIPCLLSPWSDWSDCSVTCGKGTRVRQRMLKSAVELGECNEDLEQMEKC
MLPECPMDCIMSEWSEWSECSKSCGKGHLLRTRMITLEPQFGGDPCPEVTQRKTCKIKKC
NQGAGNNDERKRRKEDRKKRRNKQAGEETADELAGCKMKSWSGWTDCTKLCGGGIQERLM
TAKKRFKNAQLTSCKDRKEIRACNVHPC
NT seq 2427 nt   +upstreamnt  +downstreamnt
atgaaagtaaagcgatcggagatgtggagagccggtgtcctgctgctgttcactggctgc
gtatgcgcgagtgtgccggaggaaccagcggacagaacgtctccatctgacggctactgc
agctggataacgcgggcacagccgcacggagctggaggcagaagagagagcaccagtgaa
ttcaggttgcgagtggaaggagacccggagcattatcagccgggcagcacttaccgagta
accctgtatgcaacaaaccctgcatacttcagaggctttacacttatcgcactgaaggaa
gggcacaatggtgaccaagaggaggattatgctggaaatttccagataatcgatgaggaa
gacacgcaattcatgacaagctgcccaccagcagtgacagaaagcactccacgcaggagg
accaggatacaagtgttctggacggcgcccccatcaggtcatggctgtgtactgctaaag
gctagtattgttcagaggaagatcatctcattccaggatgagggctcactcacgaagcgg
atgtgtgagaaagaatcgctgtatggagaaaccacagacaaacccctgctggactgctgc
gcctgtggaactgccaaatacagagtcaccttctacggcaactggtcagagaaattgcac
ccaaaagactacccaaggagagccaatcactggtcagccctcattggagcttctcattcg
aagaactatatattgtgggagtatggaggctatgctagtgaaggggtgaagcaggttgct
gaactgggctcacctgtcaagatggaagaagagatccgtcagaagggtgatgaggtcttg
actgttataaaaatgaaagcacagtggccggcgtggcaacccctcaatgttcgagcagct
ccatcagccgagttctcagtggaccgcacacgtcacctgatgtcctttttaaccatgctt
ggtcccagtcctgactggaatgtgggtctgtcttccgaggacctctgcaccagagagtgt
ggctgggtccagaaggtggttcaggacctcatcccatgggacgcaggaacagacagcggg
gtctcttatgagtctcccaacaagtctacagcaccccaggagaaaatccgtcccctcacg
agtttagatcatccacaaagccctttctatgacccggagggtggcgcaattactcccgtg
gccaggcttgttgtggagagaattgcccgaaagggtgagcagtgcaacattgtgcctgat
aatgtggacgacattgtggctgacattgcccaggaggaaaaagaagaagatgacactcca
gagacgtgtatctactccaactggtctccatggtctgcatgtagctcctcgacatgtgag
aaggggaagaggatgaggcagaggatgctgaaggcgcagctggatctcagtgtgccctgt
ccacatacacaagactttgagccctgcatcgggcccggctgcagtgatgaagattcttcc
acatgcatgatgtcagaatggatcacgtggtccccatgcagtgtttcgtgtggctcaggc
ttgcgttcaagagagcgatatgtaaagcaatttcccgatgatggctttgcttgcactcac
cccactgaagagacagaaccctgcactgtaaatgaggaatgttcttcgagcagctgtctg
gttacagaatggggtgaatgggatgcatgcagcgccacctgtgggcttggcatgaaaaga
cgagagcgaatggtgaaaatgcctccatctgatggctccatttgtggggctgaagtggtg
gaagtggagaagtgtatgatgccagaatgccatacaatcccgtgtttactgtccccgtgg
tcagactggagtgattgcagtgtaacgtgtggtaaaggcacacgggtacgtcagcggatg
cttaaatcagcagtggagttgggagaatgcaatgaggatctggagcagatggagaaatgc
atgttgccagaatgtccaatggactgtataatgtcagagtggtctgaatggtccgagtgc
agcaagtcctgtggaaagggtcacttgctgcgtacacgcatgatcactctggagcctcag
tttggaggagatccgtgccctgaggtcacacaaagaaaaacgtgcaagataaagaagtgt
aatcaaggggctggaaacaacgatgagaggaagagacgcaaagaagaccgcaagaagagg
aggaacaaacaggcaggagaagaaactgcagatgagcttgcaggatgcaaaatgaagtcg
tggtctggatggactgactgtaccaagttatgcgggggaggcatccaggagcggctcatg
acggccaagaagagatttaagaacgcacaactaacaagctgtaaagaccgaaaggagatt
cgtgcctgcaatgtccatccctgctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (62)   

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