KEGG   Danio rerio (zebrafish): 58090
Entry
58090             CDS       T01004                                 
Symbol
trpc4apa
Name
(RefSeq) transient receptor potential cation channel, subfamily C, member 4 associated protein a
  KO
K11796  Trpc4-associated protein
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dre01009]
    58090 (trpc4apa)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dre04121]
    58090 (trpc4apa)
Protein phosphatases and associated proteins [BR:dre01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     58090 (trpc4apa)
Ubiquitin system [BR:dre04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     58090 (trpc4apa)
SSDB
Motif
Pfam: DUF3689
Other DBs
NCBI-GeneID: 58090
NCBI-ProteinID: NP_571644
ZFIN: ZDB-GENE-000330-3
Ensembl: ENSDARG00000018840
UniProt: Q9IAV5
Position
11:25157375..25180330
AA seq 774 aa
MATLLGPESPCIGGKKRTRNRNIITRIRQSQIGGRGFSRGTQLPEVLLQERDKRAKWHGI
PVLLQELYESSHLNTDFTRTHTVLKELSSLLSMEAMSFVTEDRKPAQESTFPNTYTFDLF
GGVDLLVELLMRPTLTTLQKPKMNDDLVKDCLSVLYNCCICTEGVTKSLASRDDFVLFLF
TLMTNKKTFLQTATLIEDILGVKKEMIQLEWIPNLSGLVQSFDQQQLANFCRILSVTISE
PDVGNDDKHTLLAKNAQQKRNTSPSRAEVNQVTLLNIPGFIERLCKLATRKVSEATGTSN
FLQELEEWYTWLDNTLVLDALMQIATDEAEHSSTESSDESTLATIPLRHRLPQSMKIVHE
IMYKVEVLYVLCVLLMGRQRNQVHKMLAEFRLIPGLNNLFDKLIWRKYTASNHVVHGQNE
NCDCSPEISFKIQFLRLLQSFSDHHENKYLLLNAQELNELSAISLKANIPEVEALVNTDR
SLVCDGKKGLLTRVLTVMKKEPPDSSFRFWQAKAVESFLRGATSYADQMFLLKRGLLEHI
LFCIIDSGCKSRDVLQSYFDLLGELMKFNIDSFKRFNKYVNTDEKFQVFLTQINSSLVDS
NMLVRCIVLSLDRFESQTEDVKVVEVLSECCLLSYMARVENRLSFLFRLVNIINVQTLTQ
ENVSCLNTSLVILMLARRRGKLPFYLNALREKEYAEKYPGCLLNNFHNLLRFWQHHYLNK
DKDSTCLENSSCIPFSFWKETVSVLLGQDRTSPCAIISYIDEPYMELDRDLLED
NT seq 2325 nt   +upstreamnt  +downstreamnt
atggcgacgctactggggcccgagtccccttgtatcggtggaaagaagcggactcgaaac
aggaatatcatcaccagaatacggcaaagtcagatcggtggccgaggcttcagcagaggg
acgcagctccccgaagttcttcttcaggagagagataaaagggcgaaatggcacgggatt
cctgttttactccaggagctgtacgagagcagccacctgaacactgacttcacccgaaca
cacactgtcctgaaggagctgtcatctctactgtctatggaggccatgtcttttgtgacg
gaagacagaaagcctgcgcaggagtctacctttcccaatacttacacttttgatctgttt
ggaggtgtagatttactggttgaacttctgatgagacctaccctgactacactacagaag
cccaaaatgaatgatgacttggtaaaggactgcctaagcgtgttgtataactgctgcata
tgtactgaaggagtcacaaaaagcctggcgtcaagagatgattttgtattatttctgttc
accttgatgacaaacaagaagacatttttgcaaacagctacattaattgaggatattctt
ggagttaagaaggaaatgatacagcttgagtggatcccgaatctgtcaggactggttcag
agctttgaccagcagcagctcgccaacttctgtcggattctctcagtcaccatatctgag
cctgacgtggggaatgatgacaaacacacacttctggctaaaaatgcacagcagaaacgc
aacaccagcccttcgcgtgcagaggtcaaccaggtcactctgctgaacatccctggcttc
attgagcgtctctgtaagttggcaacacggaaggtgtctgaggcaaccggaacgtcaaat
tttctgcaggaactggaggagtggtacacctggctcgacaacacgctagtactggatgct
ctcatgcagatagcaactgatgaagccgagcacagcagcacagaatcgtctgatgagagt
acattggccaccatcccgctgagacatcgcttaccacagtccatgaagatagtccatgag
atcatgtacaaggtggaagtgctttacgtgctttgtgtcctgctcatgggtcgacagcgg
aaccaggtgcataaaatgttggcggagtttcgtttgattcctggactcaacaaccttttc
gacaagctcatctggaggaaatacaccgcctctaatcatgtggttcacggacagaatgaa
aactgtgattgtagcccggaaatctcatttaaaatccagttcttgaggcttctgcagagc
ttcagtgaccaccacgaaaataagtacctacttctcaacgctcaggagctgaatgagttg
agtgccatttccctaaaggcaaacatccctgaggtggaggcattagtaaacacagacagg
agtttagtgtgtgatggtaaaaaagggctcctcacgcgggtcctaacagttatgaaaaaa
gaacccccagactcttccttcagattctggcaggccaaagctgttgagagctttctgaga
ggagccacatcatatgcagaccagatgtttttgctgaagagaggcttgctggagcacatc
ctcttctgcatcattgacagcggctgcaagtccagagatgtcctgcagagctactttgac
ctgctcggggagcttatgaagttcaatattgattccttcaagagattcaacaaatatgtg
aacacagacgaaaagttccaggtgttcctcacacagatcaacagctctctggttgactcc
aacatgctggtccgctgtattgtgctctcgctggatcgcttcgagagccagacggaggat
gtgaaagtggttgaagtgctctccgagtgctgtctcctgtcctacatggctcgagtggag
aacaggctgtcctttctttttaggctggtcaacatcatcaacgtgcagaccctcacacag
gagaacgtgagttgtcttaacaccagcctggtgattctgatgttggcccggaggagaggc
aagctcccgttttacctgaacgccctgcgggagaaggaatatgcagagaaatatcctgga
tgcctgctcaacaacttccacaacctgctgcgcttttggcagcaccactacctcaacaaa
gacaaggacagcacctgcctagagaatagttcctgtattcccttcagtttctggaaggag
acagtatcagttctgctcggacaggacaggacttctccctgtgccattatcagctacata
gacgagccttacatggagctggaccgggaccttctggaggattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (1)   
   Pfam (1)   
All databases (37)   

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