KEGG   Danio rerio (zebrafish): 60642
Entry
60642             CDS       T01004                                 
Symbol
sox9b
Name
(RefSeq) transcription factor SOX-9b
  KO
K18435  transcription factor SOX9 (SOX group E)
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    60642 (sox9b)
Transcription factors [BR:dre03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    60642 (sox9b)
SSDB
Motif
Pfam: HMG_box Sox_N HMG_box_2
Other DBs
NCBI-GeneID: 60642
NCBI-ProteinID: NP_571719
ZFIN: ZDB-GENE-001103-2
Ensembl: ENSDARG00000043923
UniProt: Q9DFH1
Position
3:complement(62522542..62527667)
AA seq 407 aa
MNLLQRGLKMSVSGAPSPSLSEDSAGSPCASAGSGSDSETPRAEPPLHRDEQEKFPVCIR
DAVSQVLKGYDWSLVPMPVRVSGSGKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAE
LSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKSGSAESEDGEQ
TQISTNALFRALQRAETPDSSTGELHSPGEHSGQSQGPPTPPTTPKTDLPVCSKADLKRE
RERDRERPLQDGIDFGAVDIGELSSDVISNIEAFDVNEFDQYLPPHGAPGPAGAGFSSGY
GSAAWMHKPLASSSMANAGEQHQQRAQIKTEQLSPGHYSQQPPQQQFYSAPYSRAQYTEY
SEQHSAYYSPYPTFSYSRPPYTPAAAADTAHTHHWDPQPVYTQLSRP
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgaatctcctccagcgcgggctgaagatgagtgtgtccggagctccgagcccgagtctt
tccgaggactccgccggctctccgtgcgcctccgccggctcgggatcggacagcgagacc
ccccgcgcggagccgccgctgcaccgggacgagcaggagaagttcccggtgtgtatccgg
gacgcggtgtcgcaggtgctgaagggctacgactggtctctggtgcccatgccggtgcgg
gtgagcggctccgggaagagcaaaccgcacgtcaagagacccatgaacgcgtttatggtt
tgggctcaagccgcgcggaggaaactggcggaccagtacccgcacctgcacaacgcggag
ctcagcaaaacactcggcaaactctggagactgctgaacgagggcgagaagcgtccgttt
gtggaggaggcggagcggctgcgggtccagcataagaaagatcatccagactacaaatac
cagcccagacggaggaaatcagtgaagagcggctcagcagagtctgaagatggagagcag
acgcagatctccaccaatgcgctgttcagagccctgcagcgggcagaaacacccgactcc
agcaccggcgagctgcactctcctggagaacactccggtcagtctcagggcccccccaca
ccacccaccacccctaaaacagatctgccggtgtgcagtaaagcggatctgaagcgggag
cgggagcgggaccgagagcgccccctgcaggacggcattgacttcggtgcggtggacatc
ggtgagctgagcagtgatgtcatctccaacatagaggccttcgatgttaatgagttcgac
cagtacctgcctccgcacggggccccggggccggccggtgcagggttctccagcgggtac
ggcagcgcagcctggatgcacaaaccactcgcgagcagctccatggctaatgccggcgag
cagcaccagcagagggcgcagatcaagacggagcagctgagcccgggccactacagccag
cagccgccgcagcagcagttctacagcgccccctacagccgagcgcagtatacagagtac
agcgagcagcacagcgcctactacagcccgtaccccacattcagctacagcagacccccg
tacacccctgcagcggcggcggatactgcacacacacaccactgggacccgcagcccgtc
tacacacagctgtccagaccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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