KEGG   Danio rerio (zebrafish): 64000
Entry
64000             CDS       T01004                                 
Symbol
lima1a
Name
(RefSeq) LIM domain and actin-binding protein 1a
  KO
K23026  LIM domain and actin-binding protein 1
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:dre04812]
    64000 (lima1a)
Cytoskeleton proteins [BR:dre04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Others
     64000 (lima1a)
SSDB
Motif
Pfam: LIM
Other DBs
NCBI-GeneID: 64000
NCBI-ProteinID: NP_571739
ZFIN: ZDB-GENE-001120-1
Ensembl: ENSDARG00000101441
UniProt: Q9DEY8
Position
23:36450916..36488629
AA seq 629 aa
MSVSSFRRGQWASQSLRVTAKELSIVGVRGKNTAIAERFSKYQKAAEETSLDKKKSPEKS
TPGLRNGNLSVLKQLWEHPAETPTSPEPKAHLQNHLQQSAVKIPLESTDVQLIEGTDQQC
LSDSDQPMEKRTQRDVETLIEKPTVPLNSLKMMFEKGETLHSNVSREPGTTGDSGSDNME
PGTKESLECGVKMLDSTPLRDRMAMYQAAVTKLDFPSSPNSEAADSEARAHSGKQKENVP
PVSADVCPESNTIKSPAPDRNGSVLSPEQNQPKLVKMFPLPVRETCVTCLKTVYPLEKLV
ANQQIYHNTCFRCAYCNTKLSLVNYASLHNNVYCKPHYCQLFKAKGNYDEGFGHRPHKEL
WEGRPEGVDDQVKLSPQETSLTVEESPLVKVNVLAATLETRTQATSERVEKPLETGRLKI
SWPPQSEGDESATHTVTDGSGIKPIRPKWPPEGDTVSSNVDLESDLPKLRRSVSLKERSK
PFCIFDSAPVAQPKRCQRSPSNEKPDSEEEMSPVSSTTDTTISSEDMTEHNQSEEEDQDK
TKEDEQMEHEEKVDVQEEELSSLKCSTPDNSPPLSPESESGLDPEENQASQDVGFWDGEE
AEEDTADVTVEDLIKRNRHYDDEDDEDVV
NT seq 1890 nt   +upstreamnt  +downstreamnt
atgtcagtgagttcatttcggcgtggtcaatgggcctcccagtcattgcgagtgacggca
aaggagctctccatagtcggtgtgcggggcaaaaacacagccattgctgagcgcttttcc
aagtaccagaaggcagcagaagaaacaagtttggacaagaaaaaatctccggagaaatcg
actccaggccttcgcaacggcaatctgagtgtcctaaagcagctctgggaacatccagcc
gaaacgcctacatctccagaacccaaagcacacctccagaaccatctgcaacagtctgct
gtaaaaatcccactggagtccactgacgtccagcttattgagggcacagaccagcagtgt
ttgagcgacagtgatcagccaatggagaagcgaacgcaaagagatgtggagaccctcatc
gaaaagcccaccgtccccctcaacagcctgaagatgatgttcgagaaaggagagaccctt
catagtaatgtgtccagagagcctgggacaacaggagacagtggatctgacaatatggag
ccaggaactaaagaaagtctggagtgtggggtaaaaatgctggattcaacccctctcagg
gacaggatggccatgtaccaggcagctgtgactaagcttgatttcccatcctcccccaat
agtgaagcagcagacagtgaagcccgagctcacagtggaaaacaaaaggaaaatgtgcca
ccagtgtctgctgatgtgtgccccgaatccaacactatcaaaagtcctgctccagacagg
aatggttctgttttaagtcctgagcaaaaccagcctaaattggttaagatgttccctttg
cctgtccgtgaaacctgcgtgacgtgccttaagactgtgtacccactagagaaacttgta
gcgaatcagcagatttaccacaacacctgtttccgctgtgcctactgcaacactaaactc
agtttggtgaactacgcctctttgcacaacaacgtctactgcaagccacactactgccag
ctgtttaaagccaagggcaactacgatgagggtttcggccaccgaccccataaggagctt
tgggaaggacgccccgaaggagttgacgaccaagtaaagctttcacctcaagaaacgagc
ctaacagtagaggagtctccattggtcaaggtcaacgtgcttgcggccactttagagacc
cggacccaggccacgtcagaaagggtggagaagccattggaaacgggacgactcaagatc
tcctggcctcctcagtctgaaggggatgagagtgcaacccacacagtaactgatggcagt
ggaatcaaacccattcgccctaaatggcctccagagggcgacactgtatcaagcaatgtg
gacctggaatctgatcttccaaagcttcgcaggagcgtctcccttaaggagagaagcaaa
ccgttttgcatcttcgactccgcacccgtggctcaacccaagagatgccaaagatctccg
tcaaatgagaaaccagactccgaggaggaaatgtcacccgtgtcttccaccacagacacc
accatttcttctgaggacatgactgaacacaatcagtcggaggaggaggaccaggataag
accaaggaggatgaacagatggagcatgaggagaaagttgatgtgcaggaggaggaactg
tcttctctgaaatgcagcacgccggataacagccctccattgtcacctgagagcgagtct
ggattggatcccgaagagaaccaggcttcgcaagatgttggattttgggatggagaagaa
gcggaggaagacaccgctgatgtcactgtggaggacttgattaagaggaaccgtcattat
gatgatgaggatgatgaagatgtggtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (33)   

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