KEGG   Danio rerio (zebrafish): 654830
Entry
654830            CDS       T01004                                 
Symbol
lgi3
Name
(RefSeq) leucine-rich repeat LGI family member 3 precursor
  KO
K19999  leucine-rich repeat LGI family member 3
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    654830 (lgi3)
Membrane trafficking [BR:dre04131]
 SNARE
  SNARE associated proteins
   Syntaxin-binding proteins
    654830 (lgi3)
SSDB
Motif
Pfam: EPTP LRR_8 LRR_5 LRR_4 LRR_1 LRR_9 LRRCT
Other DBs
NCBI-GeneID: 654830
NCBI-ProteinID: NP_001034768
ZFIN: ZDB-GENE-060217-4
Ensembl: ENSDARG00000041358
UniProt: Q2HPG0
Position
8:complement(51375308..51404806)
AA seq 551 aa
MVEARPRRTLRWPDWRWSVCVLLFCMFGTAPGRKAPKSPRCPATCSCTKDSAFCVDTKVI
PKSFPTGIISLTMVNAAFTEIPEGAFSHMHLLQFLLLNSNTFSVISDDAFSGLGHLQYLF
IENNDIQALSKHTFRGLKSLTHLSLSNNNLQVLPRELFKHLDILTDLDLRGNSFRCDCKI
KWLVDWMEKTNTSVPPIYCASPFEFQGRRIHELTPRDFNCISADFAVYETYSFQSLSVES
YEFQDDQYVVFAQPNTGICTVFIWDHVNMLFKTHYNITSRSAVYCKPVVINNTLYMVVAQ
LFGGSHIYKWEDGPLRFVKIQDIDTTRVRKPNFIETFQIEGDWYFAVVDSSKAGSTSLYR
WNSNGFYSHQSLHPWHRDTHIDFLEVDGKPRLILSSASQPPVVYQWNRSQRQFVFHSQIT
DSGDVQMVKHFWVRKVLYLCLTRFIGDSKILRWDNQRFVEIQTLPSRGSMAVYPFSVGVR
LYLLLGSDYSFSRIYLWDELTQRFLPFQELNMLAPRGFAMVSVDNKDILLAASFKGKTMA
YQHLIVDLSAK
NT seq 1656 nt   +upstreamnt  +downstreamnt
atggtggaagcgaggcccagacggactctacgatggccagattggaggtggtctgtttgc
gtgctgctcttctgtatgtttgggacggcaccgggccgcaaagcccctaaaagcccacgg
tgtccagccacctgctcctgtactaaagacagcgccttctgcgtggacaccaaagtcatt
cccaagagcttcccgacgggaatcatctctctgactatggtgaacgccgccttcacagag
attcccgaaggagctttttcccacatgcacctgctgcagttcctgctgttgaactcaaac
actttctctgtgatctctgatgatgccttttctggtcttggacacctgcagtatttattt
atcgagaacaacgacatccaggcgctgtcaaagcacacattcagaggactcaagtcactg
acacacctgtccctgtccaataacaacctgcaggttcttcccagagagctcttcaagcac
ctagacatccttacagacctagacctgcgcgggaactcgtttcgttgtgactgcaagatc
aaatggctggttgactggatggagaaaaccaacacgtctgttccgcccatttactgcgcc
agtccgtttgagttccagggccgacgcatccatgagctcacaccgcgagacttcaactgc
atcagcgcagatttcgcagtttacgagacctactcgttccagtctctgtccgtggagtcg
tacgagtttcaagatgaccagtatgtggttttcgctcagcccaacactggaatctgcacc
gtcttcatttgggatcacgtcaacatgcttttcaagacacattacaacatcacatctcgt
tctgctgtctactgtaaacctgtggttatcaacaacactctctacatggttgtggcgcag
ctctttggaggatcccacatctacaaatgggaggatggtccattgcgatttgtcaaaatc
caggacatcgacaccacccgagtccgaaaacccaacttcatcgagactttccagattgaa
ggagactggtattttgcagtagtcgacagctccaaagccggttccaccagcctgtaccgc
tggaacagcaacgggttttactcacaccagtccctccatccctggcacagagacactcac
attgatttcctggaggtggacggcaaacctcgcctcatcctctccagcgcctcgcagccc
ccggtggtttaccagtggaaccgcagccagcgccagttcgttttccactctcagatcacc
gattcgggcgacgttcagatggtcaagcacttctgggtgcggaaagtgctgtatttgtgc
ctcacacgcttcatcggagactccaagatcctgcgctgggacaaccaacgctttgtggag
atccaaaccctgccatctaggggctcaatggccgtgtatcccttcagcgtcggagtgagg
ctttacctcctgctgggcagcgattattccttctccaggatttacctgtgggacgagctc
acccagcgcttcctgcccttccaggagctcaacatgctggcacctcgaggattcgccatg
gtctcagtggacaataaggatattctgctggcggccagttttaaagggaagaccatggcg
tatcagcatctaatagtggatctcagtgccaaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (33)   

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