KEGG   Danio rerio (zebrafish): 723998
Entry
723998            CDS       T01004                                 
Symbol
trim109
Name
(RefSeq) tripartite motif containing 109
Organism
dre  Danio rerio (zebrafish)
SSDB
Motif
Pfam: zf-RING_UBOX zf-B_box zf-C3HC4 zf-C3HC4_4 zf-RING_2 zf-RING_6 zf-C3HC4_2 zf-C3HC4_3 zf-RING_5 SPRY zf-RING_4 Apolipoprotein zf-RING_10 AAA_13 U-box Lebercilin SHE3 FUT8_N_cat Exonuc_VII_L zf-Nse
Other DBs
NCBI-GeneID: 723998
NCBI-ProteinID: NP_001038768
ZFIN: ZDB-GENE-060616-101
Ensembl: ENSDARG00000062429
UniProt: Q1ECU9
Position
16:complement(14064397..14074594)
AA seq 497 aa
MESRLSKQIQCSVCLGDFTDPVSLLCDHTFCRQCISNHSQSSRLRLCPECRRPYTMWDLR
SNRVLRNMVSAVREHLSEQQALQDKTVGASGVDAMRVFEEPEKLVCSEHHERLKLFCETD
QKLVCLICRDGEKHQGHIFKPVEEAAEPRKNLMLEPLSFLTKENDELQALVKKQTKEISK
TEERSRQLSAHITAQFEEMHQFLRKKEEEVKKTLEKEEKDLIEKMKRNRAEIEEKLNDGR
EKEGILHSVLDTDQPDGFLQWWTEKGLEFVENMKETESLTENIDNASQQTKFKSTVKSVN
LIANSLFLGLHETHLQFIVWKEMLGSVKPVPDRNVIHDCHDPYLRVSSDGRSVIRTSKKG
IFLRHKDYRPLARTHKTFQTGQHYWEVDVGAKLDWSVGFDGGCISNLNKDIGLHLKHDQG
YCIKEYETVTEIDLTVKPSRIGLYLDCDRCQVCFYNAEDMTLLHTSTYPSSIPYSLSLSP
GAYLAGKNSDPLMVTWN
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggagtctcggctgtcgaaacagatccagtgctccgtgtgtttgggagactttacagat
ccagtaagcctgctctgcgaccacacgttctgccggcagtgtatcagcaatcattcccag
agcagccgattgagactctgtccagaatgcaggagaccctacaccatgtgggacctccgt
tcaaaccgagtcctgaggaatatggttagtgccgttagggaacacttgagcgagcaacag
gcgctccaggacaagactgtaggagcttctggagtggacgccatgagagtgtttgaggaa
ccggagaagctggtgtgttcagaacatcatgagagactcaagctgttctgcgagacggat
cagaaactggtatgtttgatctgtagggacggcgagaagcaccaaggacacattttcaaa
cctgtggaggaggcagcggagccaagaaagaacttaatgttggagcctctgagtttcctg
acgaaggagaatgacgaactgcaggctcttgtcaagaaacagactaaagagatttctaaa
actgaggaaaggtccaggcagctctctgcacacatcactgctcagtttgaggagatgcat
cagttccttagaaaaaaggaggaagaagtgaagaaaacattggagaaagaagagaaggat
ttgatagaaaagatgaaaagaaacagagcagaaatagaagagaagctgaatgatggacga
gagaaggaagggattctgcactcagtcttggacactgatcagccagatggatttctgcag
tggtggactgaaaaaggactggaatttgttgaaaatatgaaagagacagaaagccttact
gaaaatattgacaacgcttctcaacaaaccaagttcaaatcaacagtgaaaagtgtgaat
ttaatagctaattctctgttcctcggccttcatgagactcacctgcagtttattgtttgg
aaggagatgctggggtctgtcaaaccagtccctgatcggaatgtgattcacgactgtcat
gacccgtacctgagggtctcgtctgacggacgcagcgtcatccgcacttccaaaaagggg
attttcttgcgtcacaaagactacagacctctggccaggacccacaagaccttccagacg
ggacagcattactgggaggttgacgttggagcaaagctagactggagcgtgggcttcgat
ggcggctgtataagcaacctaaacaaggacattgggcttcaccttaaacatgaccagggc
tactgcattaaagagtatgagacggtgacagagatcgacctgacagtgaaaccaagccgg
ataggcctgtatctggactgcgataggtgtcaagtgtgcttttataatgcagaggacatg
actttactgcacacctccacatatccttcgtccatcccttattcgctaagtctctcgcct
ggagcttatctggccgggaagaacagtgatccgctgatggtgacctggaactga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (20)   
   Pfam (20)   
All databases (50)   

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