KEGG   Danio rerio (zebrafish): 768285
Entry
768285            CDS       T01004                                 
Symbol
gabpb1
Name
(RefSeq) GA-binding protein subunit beta-1
  KO
K09454  GA-binding protein transcription factor, beta
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    768285 (gabpb1)
   03029 Mitochondrial biogenesis [BR:dre03029]
    768285 (gabpb1)
Transcription factors [BR:dre03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Ankyrin only
    768285 (gabpb1)
Mitochondrial biogenesis [BR:dre03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Ubiquitas transcription factors
    768285 (gabpb1)
SSDB
Motif
Pfam: Ank Ank_2 Ank_4 Ank_3 Ank_5
Other DBs
NCBI-GeneID: 768285
NCBI-ProteinID: NP_001070918
ZFIN: ZDB-GENE-061027-46
Ensembl: ENSDARG00000023659
UniProt: Q05AI6
Position
18:complement(81867..92046)
AA seq 363 aa
MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLSAQFGHYSTTEVLLRA
GVSRDARTKVDRTPLHMAASEGHLRIVELLLKHGADVNAKDMLQMSALHWAVEHTHTAVV
ELLLRYGADVHALSKFCKNALDIALDNSCHELAHILQVAMQNQINTNPESPDTLTIHTAA
PQFIIGPAGVLNLAELVSPAHSSKPSDELVSTDAVDGSLQQVVHSSGQQLITILTDGIQL
GNLQSGSQPIILTMPDGQQVLTVSDTEVAEETVVSDEPCVKRLRVKEEEEEEEEEQMTET
QDIQIQHTLSLEDFQKVSLLKQLEEANREAQKYRQQFLKKEQEAETYRQKLEEITRQSGK
KTA
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgtctctggtggatctggggaagaagctcctggaagctgctcgtgccggtcaggatgat
gaggtgcggatcctgatggccaatggagcaccgttcaccaccgactggctgggcacgtct
cctctgcacctgtcggctcagttcggtcattactccaccacggaggtgctgttgcgggcc
ggcgtgagcagagacgcgcgcactaaagtggaccgaacacccctgcacatggcggcgtct
gagggtcacctgcgcatcgtggagctgctgctgaagcacggcgcggatgtgaacgctaaa
gacatgctgcagatgagcgcgctgcactgggccgtggagcacacacacaccgctgtggtg
gagctgctgctgcgatacggagccgatgttcacgcgctcagcaagttctgcaagaacgct
ctggacatcgccctggacaacagctgccacgagctggcccacatcctgcaggtggcgatg
cagaaccagatcaacacaaacccagagagtcccgacacactgaccatccacacagcggct
ccgcagttcatcatcgggcctgcaggagtgctcaatctggcagagctggtgtcgcccgca
cacagcagcaaacccagcgatgagctggtcagcacagatgcagtggacggctccctccag
caggtggtgcactccagcgggcagcagctcatcaccatcctcactgacggcattcagctg
gggaacctgcagagcggcagccagcccataatactcaccatgcctgacggacagcaggtg
ctgacagtgtcggacacagaggtggcggaggagacggtggtcagcgatgagccgtgtgtg
aaacgactgagagtgaaggaagaggaggaggaggaggaggaagagcagatgacggagaca
caggacatacagatccagcacacactctcactggaggacttccagaaggtgtctctgctg
aagcagctggaggaggcgaacagagaggcgcagaagtaccggcagcagttcctgaagaag
gagcaggaggcagagacataccggcagaagctggaggagatcacacggcagagcgggaag
aagactgcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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