KEGG   Danio rerio (zebrafish): 792828
Entry
792828            CDS       T01004                                 
Symbol
pard6a
Name
(RefSeq) partitioning defective 6 homolog alpha
  KO
K06093  partitioning defective protein 6
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04144  Endocytosis
dre04530  Tight junction
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    792828 (pard6a)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    792828 (pard6a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dre03036]
    792828 (pard6a)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Centriolar satellite
     792828 (pard6a)
SSDB
Motif
Pfam: PB1 PDZ PDZ_6
Other DBs
NCBI-GeneID: 792828
NCBI-ProteinID: NP_001093521
ZFIN: ZDB-GENE-070705-215
Ensembl: ENSDARG00000069378
UniProt: A6YIE1
Position
18:complement(22031282..22093978)
AA seq 385 aa
MSRNHRTTLKNEESVVEVKSKFEGEYRRFALKKNTGGFQEFYQLLQTIHRIPGVDVLLGY
ADIHGDLLPINNDYNFHKALSSANPLLRIIVQKRVVDDTVPFPTGSLQRRKKGPGGLRQA
QPKSRPPLIGLPQDFRQISSIIDVDILPETHLRVRLHKHGTHKPLGFYIRDGVSVRVTSH
GVEKFPGIFISRLVKGGLADTTGLLGVNDEILEVNGIDVSGKSLDQVTDMMVANSHNLIV
TVKPAIYRSLDDTYRTFKTSAGNSSAGSRGSALSHDSAHSPASQNTSQYSNSNSVAEGDS
DDDTDLIIENDNLSTYAQNRLTNGNGSHGNAQSSGAFAHRPLPQSVSLPSSSSLSSLTTP
THNGSPTKTSSSQESMREDGNFITL
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgtcacggaatcacaggacaacgctgaaaaacgaggagagtgtggttgaggtgaagagc
aaatttgagggcgagtaccgaaggtttgcgctgaagaagaataccgggggcttccaggaa
ttctaccagctgctgcagacgattcaccggatccctggagtggacgtgctgctaggatat
gcagacatccacggagatctacttccaatcaacaatgattacaacttccacaaagccctg
tcctcagccaacccgctgcttcgaattattgttcagaagagagttgtagacgacactgtg
ccgttcccgaccggctctcttcagagaagaaaaaagggcccaggtggtctgcgtcaagca
cagccgaagagcagaccaccactcatcggccttcctcaagatttccgacaaatctcctct
atcatagatgtggacatcctacccgagacgcatctgcgtgtccgtctgcacaagcacggc
acccacaaaccgcttggattctacattcgtgacggcgtcagcgtccgtgtcacttctcac
ggtgtagagaaattccccggcatctttatctctcgcctagtgaaaggcggtttagccgac
accactgggttgctaggagtaaacgacgagattcttgaagtgaatggcattgatgtgtca
ggaaagtcactggaccaggtcactgatatgatggtggccaacagccacaacctcattgtt
acggtaaaacctgcaatttaccgcagcttagacgacacataccgtacatttaaaacatca
gctggaaacagttctgctggctcaagaggctccgccctctcacatgactccgcccacagc
cccgcctctcagaacaccagtcaatacagcaacagtaacagtgtggcagaaggtgacagt
gatgatgatactgacctgatcatcgagaacgacaacctgtccacgtacgcgcaaaaccgg
ctgactaatggcaacggcagccatggaaatgcccagtcgtcaggcgcatttgcacacagg
cccctcccacaaagtgtttccttgcccagtagcagctctttgagctccctgaccacaccc
acacacaacggcagcccgaccaagacaagcagtagccaagaaagcatgagggaagacggc
aattttatcacgttgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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