KEGG T02996: DEHRE

Dehalobacter restrictus: DEHRE_00025

Entry

DEHRE_00025       CDS       T02996

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

drs Dehalobacter restrictus

Brite

KEGG Orthology (KO) [BR:drs00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:drs03032]
    DEHRE_00025 (gyrB)
   03400 DNA repair and recombination proteins [BR:drs03400]
    DEHRE_00025 (gyrB)
Enzymes [BR:drs01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     DEHRE_00025 (gyrB)
DNA replication proteins [BR:drs03032]
Prokaryotic type
  DNA Topoisomerases
   DEHRE_00025 (gyrB)
DNA repair and recombination proteins [BR:drs03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      DEHRE_00025 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 GyrB_hook

Other DBs

NCBI-ProteinID:

AHF08717

Position

4749..6683

AA seq 644 aa
MQNESELANQINPGSDYNAGQIEVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSID
EAMAGYCDEIEVIIHQGESITVQDNGRGIPVDMHAKMQKPAVEVALTVLHAGGKFNNEAY
KVSGGLHGVGMSVVNALSVNLRVEIKKDGKKYSQEYSRGKTLTELKEIGTYQGRSGTMIT
FQPDPEIFEDIVYDYEVLAHRLKELSFLNKNVMITLIDERSEAKDVYNHNNGLIDFVEYL
NKNKDPIHQKAIVFETEKDNTKVEIALQYNESYTETLFSYANNINTTEGGTHEAGFKAAL
TRVVNDYARKNNILKGNENNLSGEDVREGLTAIISVKIMEPQFEGQTKTKLGNSEVRSIV
DSVVGEGLTTFFEENPAVAKKIVEKGLQATRARLAARKARDLTRRKSALESTSLPGKLAD
CTWKDPRYCEMYIVEGDSAGGSAKQGRNQKFQAILPLRGKILNVEKARLDRILGNMEIRA
MITALGTGISEDFDIEKARYHKVVIMTDADVDGAHIRILLLTFFYRFMKPLIENHYVYIA
QPPLFKIKNGKQIQYAYSDKELSKVMETVGREKTEIQRYKGLGEMNPEQLWETTMDPESR
TMFQVEMEDAMKADELFTMLMGDKVEPRKEFIQKHARDVRNLDI

NT seq 1935 nt +upstreamnt +downstreamnt
ttgcaaaatgaatcggaattagcaaatcaaataaatcccggatctgattataatgccggc
cagatagaagtactcgaaggattagaagctgttcggaaacgccccggtatgtacatcggt
tccaccagcagccgtggtttgcaccatctggtttatgagatcgttgacaatagcatcgat
gaggctatggctggttactgcgatgaaatagaagttattattcatcagggagagagtatt
actgttcaagataatggccgcggcataccggttgatatgcatgcaaagatgcaaaagccg
gcagtggaagttgccttgacagtattgcatgccggcggaaaatttaataacgaggcttat
aaggtttctggtggcctgcacggggtcggcatgagcgttgttaatgcgctttccgttaat
ttgcgtgtcgagatcaaaaaagatgggaaaaagtacagccaggaatattcccgcggcaaa
acactgacggaacttaaggaaataggtacgtaccaaggaagatccgggacaatgattact
ttccagcctgatccggaaatctttgaagatatcgtttatgactatgaagttctggcgcat
cgtttgaaggagctttcatttctgaataaaaatgtcatgattactctgattgacgagcgg
agcgaggccaaagatgtctataatcacaataatgggctgattgattttgtagaatattta
aataaaaataaagatccgattcatcagaaagcgattgtatttgagacggagaaagataat
acaaaggttgagatcgcccttcagtataacgaaagttataccgaaaccttattttcgtat
gctaataatatcaataccacagaaggcgggacgcacgaagcgggatttaaagcggccctg
accagagttgttaatgactacgcgcgtaaaaacaatattttaaaaggcaatgagaataac
ttaagcggtgaggatgtcagagaaggccttacagccattatttcggttaagatcatggaa
cctcagtttgaaggacagacaaagaccaagctgggtaacagtgaagttagatccattgtc
gacagcgtggttggcgaaggtttaacgaccttttttgaagaaaatccagccgttgccaag
aagattgttgaaaaaggcttgcaggctacccgggcaaggcttgccgcccgtaaggccaga
gatcttacccgcagaaaaagtgcattggaaagtacttctttgccgggtaaactggccgac
tgcacctggaaagatccaaggtactgtgaaatgtacattgtcgaaggagacagcgccggc
ggctcagccaaacaaggcaggaatcagaaatttcaagcgattctgccgttgcgcggtaaa
attttaaacgtcgaaaaagcccgattggacaggattctgggaaatatggaaataagagca
atgatcacagcgcttggaaccggcatatctgaagattttgatattgaaaaagcccgctat
cataaagttgtgattatgacagatgccgatgtcgatggcgcacatatccggattctcttg
ttgacatttttctacaggtttatgaaaccgctgattgaaaatcattatgtttatattgcg
cagccaccgctttttaagattaaaaacggtaaacaaattcaatatgcttatagtgataaa
gaattgagtaaggttatggaaactgtcggcagagaaaagacagaaatccaacgctataaa
ggtcttggtgaaatgaatcccgaacagctttgggagacaaccatggatcctgaatcgcgg
accatgttccaggtcgaaatggaagatgccatgaaagcggatgaattgttcacgatgctg
atgggcgataaagtggagccccgtaaggaatttattcaaaaacatgccagggatgtacga
aatctggatatttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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