KEGG   Desulfohalobium retbaense: Dret_0042
Entry
Dret_0042         CDS       T00989                                 
Name
(GenBank) AMP-dependent synthetase and ligase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
drt  Desulfohalobium retbaense
Pathway
drt00061  Fatty acid biosynthesis
drt00071  Fatty acid degradation
drt01100  Metabolic pathways
drt01212  Fatty acid metabolism
drt02024  Quorum sensing
Module
drt_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:drt00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    Dret_0042
   00071 Fatty acid degradation
    Dret_0042
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Dret_0042
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:drt01004]
    Dret_0042
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:drt04147]
    Dret_0042
Enzymes [BR:drt01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     Dret_0042
Lipid biosynthesis proteins [BR:drt01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   Dret_0042
Exosome [BR:drt04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   Dret_0042
  Exosomal proteins of breast cancer cells
   Dret_0042
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: ACV67344
UniProt: C8WZ69
Position
54631..56523
AA seq 630 aa
MTNPAPRPTLFDAFLESYKNYKHQTAFIYRVGDEQFEVSYAKLFEDALLLAKAFRGQGIV
KGDKVFLLSDNRYAWIVTDLALMALGAVSVPRGSDTPSSELAYILDHSECAYLILETEGL
FNQHRELIEQRALQGVFVIASEHPAEPGMLTYSQLLANRSLSLEDLRQLMQVKRQVGGDD
LVTIIYTSGTTGTPKGVKLTHANIMHNVQNLPDLIRLTSEDRWLSILPTWHIFERTVEYV
ALSRGSCIVYSSIRTFAADLERFKPTLVATVPRIWESLYGKVNAALKKESPRKARLFQFL
VSVSSSFRLNSRRISGRLPRFEHEPWWRVLPRKARALACVVALAPLYAVARAKLAPVKKK
FGGRLRLAISGGGSLPPFLDEWIDAIGIRITNAYGMTECSPGIAGRGLDCRTFGTLGPPF
PYTEVRIAGQDDIEVPTGTEGEIQVRGPQVFHGYYHNNEANAESFTPDGFFRTGDLGKKT
LNGELVITGRAKEIIVLASGENIDPTNIEATISTFPFVQDAVLVGQDKKGLGALIVPDLE
KLRQYVAEQYNHVVNEAGDVLQDKQIVESLKREMNKLLKPKRGFKPYEKLHSIHFLNREF
KLGEELTNTLKKKRHVIEQKYQDIINRLLK
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgaccaatccggcgccccggcccaccctttttgatgcttttttggaaagctacaagaat
tataagcaccagacggcgtttatctaccgggtgggcgacgagcaattcgaggtttcgtat
gcaaaactcttcgaggacgcgctgctcttggccaaggccttccggggacagggaatcgtc
aaaggggacaaggtctttctgctctcggacaaccggtacgcctggatcgtcaccgacctg
gccctgatggccctcggcgcggtcagtgtgccgcgcggcagcgacaccccgtcgtcagaa
ctcgcctatatcctggaccattcggaatgcgcctatctgatcctggaaaccgaggggctt
ttcaaccagcaccgggaactcatcgagcagcgcgccttgcaaggggttttcgtcatcgcc
tctgaacaccctgcggaaccagggatgctgacctattcccagctcctggccaaccggagt
ttgagccttgaggatttgcgacagctcatgcaggtcaagcgtcaggtcgggggcgacgat
ctggtgaccatcatctacacctcgggcaccaccgggactcccaagggggtcaagctgacc
cacgccaatatcatgcacaatgtgcagaatctgcccgacctcatccggctcaccagcgag
gatcgctggctgtccatcttgcccacctggcatattttcgagcggaccgtggagtatgtg
gccctgtcgcgggggtcgtgcatcgtttactcctccatccggacctttgccgcagacctg
gagcggttcaagccgaccctggtggccacagtgccgcgtatctgggagtcgctctacggc
aaggtcaatgccgcactgaaaaaggaaagccccagaaaagcccggctctttcagtttttg
gtgagtgtttcgtcctcctttcggctcaatagccggcgtatttcgggacggttgccgcgc
tttgagcatgagccgtggtggcgggtgctcccacgcaaggcccgcgccctggcttgcgtt
gtcgctttggcgcccctgtatgccgtggcccgggccaagttggccccggtgaaaaagaag
ttcggtggccggttgcgcttggctatcagtggcgggggaagcctgccgccgtttcttgac
gaatggattgatgccatcgggatacggatcaccaacgcctacgggatgaccgaatgctcg
ccgggcattgccggtcgcggtctggactgccggacattcggcaccctggggccgcccttt
ccctacaccgaagtccgcatcgcggggcaggacgacattgaggtcccgaccggaacggaa
ggggagatccaggtccgcggcccccaggttttccacggctattaccacaacaatgaggcc
aatgccgaatccttcaccccggacgggtttttccgcaccggtgacctgggcaaaaagacc
ctcaatggggaactggtcatcaccggccgggccaaggagatcattgtcctggccagcggc
gaaaatatcgatcccacgaatattgaggccaccatttcgacctttccctttgtccaggac
gccgttctcgtgggacaagacaaaaaaggcctcggcgccttgattgttccggatttggaa
aagctccggcagtatgtggctgagcagtacaaccatgtggtgaacgaggccggggatgtt
ctccaggacaagcagatcgtggaaagtctcaagcgggaaatgaacaagctgttgaagccg
aagcggggctttaagccttatgaaaagctccattcgatccattttttgaacagggaattc
aagcttggcgaggaattgaccaacacgctgaagaaaaaacggcacgtcattgagcagaag
tatcaggatattatcaatcggctgctgaagtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (37)   

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