KEGG T00989: Dret

Desulfohalobium retbaense: Dret_0497

Entry

Dret_0497         CDS       T00989

Name

(GenBank) NusA antitermination factor

K02600

transcription termination/antitermination protein NusA

Organism

drt Desulfohalobium retbaense

Brite

KEGG Orthology (KO) [BR:drt00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:drt03021]
    Dret_0497
   03009 Ribosome biogenesis [BR:drt03009]
    Dret_0497
Transcription machinery [BR:drt03021]
Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     Dret_0497
Ribosome biogenesis [BR:drt03009]
Prokaryotic type
  rRNA transcription factors
   Dret_0497

SSDB

Motif

Pfam:

NusA_N KH_5 S1 KH_1 KH_2 HHH_5

Other DBs

NCBI-ProteinID:

ACV67794

UniProt:

C8X0G9

Position

complement(603188..604510)

AA seq 440 aa
MSMELKKAIDQISKDRGIDRDLLIDTLEEAVRSSVNKKFKNKLDIEVSFDEEAGDIEVYQ
FKVVVEEVDDPNTEISLDEARIEDPNVQLEDELGFRMEISDLGRIAAQSAKQVIIQRMRD
AEQEIIYEEYKDRRGEIISGIIQRRDRAGWIINLGRTEAILPKQEQIPRERFRRGDRVQG
YIIDVRKEGRGPQIVVSRSHPDYMAALFKREVPEVGDGTVTIMGVARDPGKRAKVAVLSQ
DSDVDPVGACVGVRGSRIQNIVQEFKGERIDIVVWNHDVATYAMNALSPAKISRMTVDDV
EKTLEVVVPDDQLTLAIGRKGQNVKLASKLLGWKIDIITESRYGADPSDQADLEQAEHVT
GIPTDHFVQAGLGSLDALREASDEQLAAVDGMDTSKMADLRAALNLLAPNRDTREDDGIQ
ASTADAPSHDTVVAPDDSTE

NT seq 1323 nt +upstreamnt +downstreamnt
atgagtatggaattaaaaaaagctattgatcagatcagcaaggaccggggcatcgatcgc
gatttgctcatcgacaccctggaagaagcggtccggtcctctgtaaataaaaaattcaaa
aacaaattggacatcgaagtctcgtttgatgaagaggctggggacatcgaagtctatcaa
ttcaaggttgttgtcgaggaagttgacgacccgaataccgagatttcgctggacgaagcc
cgcatcgaagatcccaatgtccagttggaagacgaactcggcttccgcatggaaatttcc
gacttggggcgtatcgccgcccaatcggccaagcaggttatcatccagcgcatgcgcgac
gccgagcaggaaatcatctacgaggaatacaaggaccgccgcggagagatcatcagcggc
atcatccagcgccgcgaccgggcgggatggatcatcaacctcgggcgcaccgaggccatc
ctccccaagcaggaacagatcccgcgcgaacggttccggcgtggcgaccgggtccaaggg
tatatcatcgatgtccgcaaggaaggccgtggtcctcagatcgtggtctcccgctcccac
cccgactacatggcggcgttgttcaaacgcgaagtgccggaggtcggcgacgggaccgtg
accatcatgggcgtcgcccgcgatccgggcaagcgggccaaagtggctgtgctttctcag
gattccgatgtcgaccccgtgggcgcctgcgtcggtgtccggggatcccggattcagaac
atcgttcaggaattcaagggagaacggatcgatatcgtggtctggaaccacgatgtggcc
acctacgccatgaacgccctttccccggcaaaaatttcccggatgaccgtcgacgatgtc
gaaaaaaccctggaagtcgtcgtgccagacgaccaattgaccttggccattggccgcaag
gggcagaacgtcaagctggcttccaaacttctggggtggaagatcgatatcatcacggaa
agccgctacggggcggacccgagcgatcaggccgatctcgaacaggcagaacatgtgacc
gggattccgacggaccattttgtacaggcgggcctgggcagcttggacgccttacgcgag
gccagcgacgagcaattggcggccgtagacggcatggacacgtccaaaatggctgacttg
cgggccgcgctgaatctgctggccccgaatcgggacacgcgtgaggacgacggaatccag
gcctccactgccgacgcgcccagccacgatactgttgtggccccggacgacagcaccgaa
taa

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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