KEGG   Dinoroseobacter shibae: Dshi_0307
Entry
Dshi_0307         CDS       T00612                                 
Symbol
rpsM
Name
(GenBank) 30S ribosomal protein S13
  KO
K02952  small subunit ribosomal protein S13
Organism
dsh  Dinoroseobacter shibae
Pathway
dsh03010  Ribosome
Brite
KEGG Orthology (KO) [BR:dsh00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    Dshi_0307 (rpsM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:dsh03011]
    Dshi_0307 (rpsM)
Ribosome [BR:dsh03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    Dshi_0307 (rpsM)
  Bacteria
    Dshi_0307 (rpsM)
  Archaea
    Dshi_0307 (rpsM)
SSDB
Motif
Pfam: Ribosomal_S13 HHH_5
Other DBs
NCBI-ProteinID: ABV92056
RoseoBase: Dshi_0307
UniProt: A8LM79
Position
297504..297947
AA seq 147 aa
METPRDFGCEKRFWHDGTAPKRTYDLARIAGVNLPTGKRTPIALTYITGIGLSSAQAICE
AVGIEESRRLNELSDAEILAIREHIDANYTVEGDLRRETQMNIKRLMDLGCYRGLRHRRN
LPVRGQRTHTNARTRKGPAKAIAGKKK
NT seq 444 nt   +upstreamnt  +downstreamnt
gtggagaccccacgggattttggttgtgaaaaaaggttctggcatgacggaaccgcaccg
aaaaggacatatgatttggcacgtattgctggcgtgaacctgcccacgggcaagcgcacc
cccatcgccctcacctacatcaccgggatcggcctgagctccgcgcaagcgatctgcgaa
gccgtgggcatcgaagagagccgccgtctgaacgagctgtcggatgccgagatccttgcg
atccgtgagcatatcgacgccaactacacggtcgaaggcgatctgcgccgcgagacgcag
atgaacatcaagcgtctgatggacctgggctgctaccgcggtctgcgtcatcgccgcaac
ctccccgttcgcggtcagcggacccacaccaacgcacgcacgcgcaagggccccgcaaag
gccattgccggcaagaagaagtaa

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